RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	NRIP2	Q9BQI9	281 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	RSRP1	Q9BUV0	290 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	OPA3	Q9H6K4	179 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	HEATR1	Q9H583	2144 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ANKRD30BL	A7E2S9	258 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	KLRC4-KLRK1	H3BQV0	150 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ZNF44	P15621	663 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SELE	P16581	610 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	RBX1	P62877	108 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	GNMT	Q14749	295 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	RNFT1	Q5M7Z0	435 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	IL34	Q6ZMJ4	242 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	C22orf15	Q8WYQ4	148 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	MISP3	Q96FF7	219 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	PLEKHA2	Q9HB19	425 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390		Q9N2K0	584 aa		11.87	□□□□□ -0.51
CACNA1C-231	ENST00000616390	KMT2E	Q8IZD2	1858 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	C21orf140	B9A014	251 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SSSCA1	O60232	199 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TSPAN15	O95858	294 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	CELA3B	P08861	270 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	PVALB	P20472	110 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	EPHA1	P21709	976 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	PRRX1	P54821	245 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	MIDN	Q504T8	468 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SPAG16	Q8N0X2	631 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SUMF2	Q8NBJ7	301 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SAT2	Q96F10	170 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	FAM86C1	Q9NVL1	165 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ICE1	Q9Y2F5	2266 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	LINC00614	P0C842	121 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ZNF883	P0CG24	379 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ARR3	P36575	388 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	CAMLG	P49069	296 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390		Q5PR19	223 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	MDP1	Q86V88	176 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TMEM217	Q8N7C4	229 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	OR51H1	Q8NH63	302 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	EIF5A2	Q9GZV4	153 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	GOLT1B	Q9Y3E0	138 aa		11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-231	ENST00000616390	IGKV1-6	A0A0C4DH72	117 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ADAM20	O43506	726 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	PF4V1	P10720	104 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	ERVS71-1	P61550	626 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	IZUMO4	Q1ZYL8	232 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	VHLL	Q6RSH7	139 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	P4HA3	Q7Z4N8	544 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	MYPOP	Q86VE0	399 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	OR5T1	Q8NG75	326 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	RCC2	Q9P258	522 aa	Known RBP	11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	BTBD17	A6NE02	478 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SLC22A20	A6NK97	555 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TMEM238	C9JI98	176 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	GPR137B	O60478	399 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	CST7	O76096	145 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	IL18BP	O95998	194 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SRSF6	Q13247	344 aa	Known RBP	11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	NRN1L	Q496H8	165 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	BTNL8	Q6UX41	500 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	DMBX1	Q8NFW5	382 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	C20orf24	Q9BUV8	137 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TMEM222	Q9H0R3	208 aa		11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1C-231	ENST00000616390	WISP2	O76076	250 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SLC34A2	O95436	690 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	NKX2-1	P43699	371 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	KCNJ3	P48549	501 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	F2RL1	P55085	397 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	HOXA4	Q00056	320 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SEC11C	Q9BY50	192 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SIRPB1	O00241	398 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	RNPS1	Q15287	305 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	UBAC2	Q8NBM4	344 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	OR5A2	Q8NGI9	324 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	OR5P3	Q8WZ94	311 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	KIRREL1	Q96J84	757 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	GAL3ST2	Q9H3Q3	398 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	SPRR3	Q9UBC9	169 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	TMED3	Q9Y3Q3	217 aa		11.84	□□□□□ -0.51
CACNA1C-231	ENST00000616390	CEP250	Q9BV73	2442 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	TRGV5	A0A0B4J1U4	118 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	TRDC	B7Z8K6	153 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	LYZL6	O75951	148 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	NAPSA	O96009	420 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	IDH3G	P51553	393 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	UCP3	P55916	312 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	ZNF766	Q5HY98	468 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	ZFP82	Q8N141	532 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	LRTM2	Q8N967	370 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	FER1L6-AS2	Q96M78	137 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	GSX1	Q9H4S2	264 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	RBM7	Q9Y580	266 aa	Known RBP	11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	DOCK11	Q5JSL3	2073 aa		11.83	□□□□□ -0.52
CACNA1C-231	ENST00000616390	ZNF724	A8MTY0	619 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms