RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	C11orf88	Q6PI97	169 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	TRAT1	Q6PIZ9	186 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	ZNF554	Q86TJ5	538 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	TMEM219	Q86XT9	240 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	OR4C13	Q8NGP0	309 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	OR4K15	Q8NH41	348 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	FCGR1B	Q92637	280 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	LPAR5	Q9H1C0	372 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	KCNK15	Q9H427	330 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	ZNF702P	Q9H963	129 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	GFOD1	Q9NXC2	390 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	TRAPPC2L	Q9UL33	140 aa		13.4	□□□□□ -0.26
CCND3-222	ENST00000612455	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.4	□□□□□ -0.26
CCND3-222	ENST00000612455		A0A0A6YYD4	124 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	SHISA3	A0PJX4	238 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	CCRL2	O00421	344 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	LDLRAD4	O15165	306 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	ARSB	P15848	533 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	RCC1	P18754	421 aa	Predicted RBP	13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	RANBP1	P43487	201 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	TMEM30B	Q3MIR4	351 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	C6orf183	Q5T699	404 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	CCDC144NL	Q6NUI1	221 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	C16orf82	Q7Z2V1	217 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	THNSL2	Q86YJ6	484 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	MRPL30	Q8TCC3	161 aa	Known RBP	13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	NEDD4L	Q96PU5	975 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	SULT4A1	Q9BR01	284 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	NICN1	Q9BSH3	213 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	FAAP24	Q9BTP7	215 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	PLGRKT	Q9HBL7	147 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	RAB9B	Q9NP90	201 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	SIGLEC9	Q9Y336	463 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	MGAM2	Q2M2H8	2515 aa		13.39	□□□□□ -0.27
CCND3-222	ENST00000612455	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	SPINT2	O43291	252 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	FGF9	P31371	208 aa	Predicted RBP	13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	ARHGDIB	P52566	201 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	MADCAM1	Q13477	382 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	P2RY14	Q15391	338 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	RAB11B	Q15907	218 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	C2orf76	Q3KRA6	126 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF773	Q6PK81	442 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF439	Q8NDP4	499 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	OR51D1	Q8NGF3	324 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	UBALD1	Q8TB05	177 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	FAM3D	Q96BQ1	224 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	OCSTAMP	Q9BR26	566 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	SERTAD4	Q9NUC0	356 aa		13.38	□□□□□ -0.27
CCND3-222	ENST00000612455	WNK1	Q9H4A3	2382 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455		A0A1W2PPI3	338 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	SDCBP	O00560	298 aa	Predicted RBP	13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	PDCD5	O14737	125 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	NAPSA	O96009	420 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	HBZ	P02008	142 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	CD24	P25063	80 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	BLVRB	P30043	206 aa	Predicted RBP	13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	MNDA	P41218	407 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	GNG10	P50151	68 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	TMEM50B	P56557	158 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	BLCAP	P62952	87 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	DIAPH2-AS1	Q14236	149 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	FBLN7	Q53RD9	439 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	STEAP3	Q658P3	488 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF880	Q6PDB4	577 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	C6orf201	Q7Z4U5	140 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	OR1L1	Q8NH94	360 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	OR2T6	Q8NHC8	308 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	CFHR4	Q92496	578 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	ST6GALNAC6	Q969X2	333 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	RPE	Q96AT9	228 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	RBM14	Q96PK6	669 aa	Known RBP	13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	URM1	Q9BTM9	101 aa	Known RBP	13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	PRSS22	Q9GZN4	317 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	LIN7B	Q9HAP6	207 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	TAF9B	Q9HBM6	251 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	HSF4	Q9ULV5	492 aa		13.37	□□□□□ -0.27
CCND3-222	ENST00000612455	IGHV3-43	A0A0B4J1X8	118 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455		A0A1W2PPE3	182 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	SOCS1	O15524	211 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	IGHV3-43D	P0DP04	118 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	RAB7A	P51149	207 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF134	P52741	427 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	CLDN12	P56749	244 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	HABP2	Q14520	560 aa	Predicted RBP	13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	KCTD21	Q4G0X4	260 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	NKAPL	Q5M9Q1	402 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	LY6G6F	Q5SQ64	297 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455		Q6ZS46	218 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	SLC25A48	Q6ZT89	311 aa	Known RBP	13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	OR8H3	Q8N146	312 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	TOMM40L	Q969M1	308 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	STEAP1	Q9UHE8	339 aa		13.36	□□□□□ -0.27
CCND3-222	ENST00000612455	TRBV6-6	A0A0A6YYG2	114 aa		13.35	□□□□□ -0.27
CCND3-222	ENST00000612455	IFITM5	A6NNB3	132 aa		13.35	□□□□□ -0.27
CCND3-222	ENST00000612455	OR2F2	O95006	317 aa		13.35	□□□□□ -0.27
CCND3-222	ENST00000612455	PSMB9	P28065	219 aa		13.35	□□□□□ -0.27
CCND3-222	ENST00000612455	ZNF137P	P52743	207 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms