RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 Q6ZPA2 131 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 BATF2Q8N1L9 274 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 HPSE2Q8WWQ2 592 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 ERGIC1Q969X5 290 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 STARD4Q96DR4 205 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SYT3Q9BQG1 590 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 CRIM1Q9NZV1 1036 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SFTPCP11686 197 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 GPM6AP51674 278 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 HERV-K104P61576 105 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 ZNF616Q08AN1 781 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 MRPL49Q13405 166 aaKnown RBP11.83□□□□□ -0.52
COPS7B-223ENST00000611614 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 RBMS3Q6XE24 437 aaKnown RBP11.83□□□□□ -0.52
COPS7B-223ENST00000611614 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 LIAT1Q6ZQX7 453 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 ZNF610Q8N9Z0 462 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 C1orf162Q8NEQ5 155 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-223ENST00000611614 POM121L2Q96KW2 1035 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 SFXN3Q9BWM7 321 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
COPS7B-223ENST00000611614 KCNJ16Q9NPI9 418 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 DOCK7Q96N67 2140 aa11.83□□□□□ -0.52
COPS7B-223ENST00000611614 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 TMEM8BA6NDV4 472 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 A6NLC8 198 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 AP4M1O00189 453 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 IFNA17P01571 189 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 AADACP22760 399 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 HAAOP46952 286 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 FGF12P61328 243 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 KRBOX4Q5JUW0 171 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 Q6ZS49 121 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 MDP1Q86V88 176 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 CCDC71LQ8N9Z2 235 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 C18orf12Q96KH6 178 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 OPN3Q9H1Y3 402 aaPredicted RBP11.82□□□□□ -0.52
COPS7B-223ENST00000611614 OPA3Q9H6K4 179 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
COPS7B-223ENST00000611614 ARHGAP21Q5T5U3 1957 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 SCGB1D2O95969 90 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 COX5AP20674 150 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 DUSP1P28562 367 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 GABRA6Q16445 453 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
COPS7B-223ENST00000611614 TBC1D28Q2M2D7 210 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 DOLPP1Q86YN1 238 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 OR8G5Q8NG78 346 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 TMPRSS5Q9H3S3 457 aa11.82□□□□□ -0.52
COPS7B-223ENST00000611614 NGFP01138 241 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 AKR1C3P42330 323 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 POLR2GP62487 172 aaKnown RBP eCLIP11.81□□□□□ -0.52
COPS7B-223ENST00000611614 CLINT1Q14677 625 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 ANKRD39Q53RE8 183 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 LGI3Q8N145 548 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 OR5L1Q8NGL2 311 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 MSI2Q96DH6 328 aaKnown RBP11.81□□□□□ -0.52
COPS7B-223ENST00000611614 HIST1H2AAQ96QV6 131 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 PPYP01298 95 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 SULT1A1P50225 295 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 UNKLQ9H9P5 680 aaKnown RBP11.81□□□□□ -0.52
COPS7B-223ENST00000611614 MTCH1Q9NZJ7 389 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 SH3BGRL2Q9UJC5 107 aa11.81□□□□□ -0.52
COPS7B-223ENST00000611614 TRAPPC2LH3BP13 241 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CGAP01215 116 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 PRH1P02810 166 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 GLI4P10075 376 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CBR1P16152 277 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CEACAM8P31997 349 aaPredicted RBP11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CASP6P55212 293 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
COPS7B-223ENST00000611614 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CXorf67Q86X51 503 aaPredicted RBP11.8□□□□□ -0.52
COPS7B-223ENST00000611614 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 Q9N2K0 584 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 SPTA1P02549 2419 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 A0A1W2PR80 420 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 A6NJY4 79 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
COPS7B-223ENST00000611614 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms