RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CYYR1Q96J86 154 aa17.16■□□□□ 0.34
TMEM248-207ENST00000607045 S100A13Q99584 98 aa17.16■□□□□ 0.34
TMEM248-207ENST00000607045 MCRIP2Q9BUT9 160 aaKnown RBP17.16■□□□□ 0.34
TMEM248-207ENST00000607045 GPR61Q9BZJ8 451 aa17.16■□□□□ 0.34
TMEM248-207ENST00000607045 ABCG5Q9H222 651 aa17.16■□□□□ 0.34
TMEM248-207ENST00000607045 DIMT1Q9UNQ2 313 aaKnown RBP17.16■□□□□ 0.34
TMEM248-207ENST00000607045 ORC5O43913 435 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 IGFBP3P17936 291 aaPredicted RBP17.15■□□□□ 0.34
TMEM248-207ENST00000607045 PNLIPRP3Q17RR3 467 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 TEX38Q6PEX7 206 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 ZNF497Q6ZNH5 498 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 NEK7Q8TDX7 302 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 RTN4IP1Q8WWV3 396 aaPredicted RBP17.15■□□□□ 0.34
TMEM248-207ENST00000607045 TFAP2CQ92754 450 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 GHSRQ92847 366 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 ZNF184Q99676 751 aaPredicted RBP17.15■□□□□ 0.34
TMEM248-207ENST00000607045 B9D2Q9BPU9 175 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 CKLFQ9UBR5 152 aa17.15■□□□□ 0.34
TMEM248-207ENST00000607045 EFCAB10A6NFE3 127 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 H0YHG0 523 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 CCL24O00175 119 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 AP4M1O00189 453 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 SLC6A1P30531 599 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 F2RL1P55085 397 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 RAB25P57735 213 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 DEFB136Q30KP8 78 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 IZUMO1Q8IYV9 350 aa17.14■□□□□ 0.33
TMEM248-207ENST00000607045 LIN7CQ9NUP9 197 aaKnown RBP17.14■□□□□ 0.33
TMEM248-207ENST00000607045 TRAV8-7A0A075B6U6 113 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 A0A1W2PPK0 400 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 C12orf77C9JDV5 145 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 GTF2F2P13984 249 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 CD1BP29016 333 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 CAPGP40121 348 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 VHLP40337 213 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 TAS2R43P59537 309 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 RPS11P62280 158 aaKnown RBP eCLIP17.13■□□□□ 0.33
TMEM248-207ENST00000607045 RIPK1Q13546 671 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 MPV17LQ2QL34 196 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 CT45A1Q5HYN5 189 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 UNQ9370/PRO34162Q6UXP9 181 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 C5orf24Q7Z6I8 188 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 LINC00596Q86U02 117 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 ZFP41Q8N8Y5 198 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 C8orf31Q8N9H6 132 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 CT45A3Q8NHU0 189 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 SMIM19Q96E16 107 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 S1PR3Q99500 378 aa17.13■□□□□ 0.33
TMEM248-207ENST00000607045 PAK1IP1Q9NWT1 392 aaPredicted RBP17.13■□□□□ 0.33
TMEM248-207ENST00000607045 TRBV5-5A0A0J9YX44 114 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 AIPO00170 330 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 ZNF780AO75290 641 aaPredicted RBP17.12■□□□□ 0.33
TMEM248-207ENST00000607045 GPX5O75715 221 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 MOSP00540 346 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 GPR50Q13585 617 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 SYT6Q5T7P8 510 aaPredicted RBP17.12■□□□□ 0.33
TMEM248-207ENST00000607045 DMKNQ6E0U4 476 aaPredicted RBP17.12■□□□□ 0.33
TMEM248-207ENST00000607045 ZNF439Q8NDP4 499 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 OR10V1Q8NGI7 309 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 OR4K15Q8NH41 348 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 OR1L1Q8NH94 360 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 HSPB9Q9BQS6 159 aa17.12■□□□□ 0.33
TMEM248-207ENST00000607045 ADARB1P78563 741 aaKnown RBP17.11■□□□□ 0.33
TMEM248-207ENST00000607045 DGCR2P98153 550 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 GLIPR1L1Q6UWM5 242 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 STX19Q8N4C7 294 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 MUL1Q969V5 352 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 RASL11BQ9BPW5 248 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■□□ 17.1
TMEM248-207ENST00000607045 CNOT2Q9NZN8 540 aaKnown RBP17.11■□□□□ 0.33
TMEM248-207ENST00000607045 TRAPPC2LQ9UL33 140 aa17.11■□□□□ 0.33
TMEM248-207ENST00000607045 MCRIP1C9JLW8 97 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 MYL12BO14950 172 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 RCC1P18754 421 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 CDX1P47902 265 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 LUMP51884 338 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 ST3GAL4Q11206 333 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 KIR2DS1Q14954 304 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 CXorf66Q5JRM2 361 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 SLC25A48Q6ZT89 311 aaKnown RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 PRR18Q8N4B5 295 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 ZNF485Q8NCK3 441 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 THRSPQ92748 146 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 BANF2Q9H503 90 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 ETAA1Q9NY74 926 aa17.1■□□□□ 0.33
TMEM248-207ENST00000607045 RCC2Q9P258 522 aaKnown RBP17.1■□□□□ 0.33
TMEM248-207ENST00000607045 HBZP02008 142 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 IL3RAP26951 378 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 CFHR3Q02985 330 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 FOXE3Q13461 319 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 Q499Y3 187 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 YIF1BQ5BJH7 314 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 OGFRL1Q5TC84 451 aaPredicted RBP17.09■□□□□ 0.33
TMEM248-207ENST00000607045 RAB12Q6IQ22 244 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 FAM71E2Q8N5Q1 922 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 RNF152Q8N8N0 203 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 RITA1Q96K30 269 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 PGLYRP3Q96LB9 341 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 GNG12Q9UBI6 72 aa17.09■□□□□ 0.33
TMEM248-207ENST00000607045 MRPS28Q9Y2Q9 187 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms