RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 DCTN2Q13561 401 aaKnown RBP10.33□□□□□ -0.76
RPS28-204ENST00000602140 GPR50Q13585 617 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 DEFB136Q30KP8 78 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 CXorf66Q5JRM2 361 aaPredicted RBP10.33□□□□□ -0.76
RPS28-204ENST00000602140 STX19Q8N4C7 294 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 OR13C5Q8NGS8 318 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 SMIM19Q96E16 107 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
RPS28-204ENST00000602140 WWC2-AS2Q96NR7 200 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 S1PR3Q99500 378 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 ZNF184Q99676 751 aaPredicted RBP10.33□□□□□ -0.76
RPS28-204ENST00000602140 RASL11BQ9BPW5 248 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 GON7Q9BXV9 100 aa10.33□□□□□ -0.76
RPS28-204ENST00000602140 MAGEA13PA6NCF6 341 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 C12orf77C9JDV5 145 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 MOSP00540 346 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 IGFBP3P17936 291 aaPredicted RBP10.32□□□□□ -0.76
RPS28-204ENST00000602140 DCKP27707 260 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 LUMP51884 338 aaPredicted RBP10.32□□□□□ -0.76
RPS28-204ENST00000602140 F2RL1P55085 397 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 GP2P55259 537 aaKnown RBP10.32□□□□□ -0.76
RPS28-204ENST00000602140 FOXE3Q13461 319 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 Q3ZCU0 254 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
RPS28-204ENST00000602140 C10orf67Q8IYJ2 551 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 GHSRQ92847 366 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 S100A14Q9HCY8 104 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 BABAM2Q9NXR7 383 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 TRAPPC2LQ9UL33 140 aa10.32□□□□□ -0.76
RPS28-204ENST00000602140 TRBV5-5A0A0J9YX44 114 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 MCRIP1C9JLW8 97 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 SPINT2O43291 252 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 TXNL1O43396 289 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
RPS28-204ENST00000602140 RAMP3O60896 148 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 LALBAP00709 142 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 ELANEP08246 267 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
RPS28-204ENST00000602140 ZNF134P52741 427 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 GPR176Q14439 515 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 KIR2DS1Q14954 304 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 SLC25A48Q6ZT89 311 aaKnown RBP10.31□□□□□ -0.76
RPS28-204ENST00000602140 PQLC1Q8N2U9 271 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 PRR18Q8N4B5 295 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 ZNF555Q8NEP9 628 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 OR8H1Q8NGG4 311 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 OR10V1Q8NGI7 309 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 OR5M8Q8NGP6 311 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 OR8U1Q8NH10 309 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 OR4K15Q8NH41 348 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 HSPB9Q9BQS6 159 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 SPACA1Q9HBV2 294 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 ETAA1Q9NY74 926 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 RCC2Q9P258 522 aaKnown RBP10.31□□□□□ -0.76
RPS28-204ENST00000602140 GNG12Q9UBI6 72 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 CKLFQ9UBR5 152 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 CLEC2DQ9UHP7 191 aa10.31□□□□□ -0.76
RPS28-204ENST00000602140 TRAV8-7A0A075B6U6 113 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 GPX5O75715 221 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 MYL12AP19105 171 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 VDAC1P21796 283 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 SOX6P35712 828 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 ZNF137PP52743 207 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 CFHR3Q02985 330 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 Q499Y3 187 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 CT45A1Q5HYN5 189 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 C9orf66Q5T8R8 295 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 DMKNQ6E0U4 476 aaPredicted RBP10.3□□□□□ -0.76
RPS28-204ENST00000602140 RAB12Q6IQ22 244 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 GLIPR1L1Q6UWM5 242 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 FAM71E2Q8N5Q1 922 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 ZFP41Q8N8Y5 198 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 OR1L1Q8NH94 360 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 CT45A3Q8NHU0 189 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 MUL1Q969V5 352 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
RPS28-204ENST00000602140 DIMT1Q9UNQ2 313 aaKnown RBP10.3□□□□□ -0.76
RPS28-204ENST00000602140 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
RPS28-204ENST00000602140 EXOSC1Q9Y3B2 195 aaKnown RBP10.3□□□□□ -0.76
RPS28-204ENST00000602140 A0A1W2PPK0 400 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 IRGMA1A4Y4 181 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 SEC14L6B5MCN3 397 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 IGHG4P01861 327 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 HBZP02008 142 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
RPS28-204ENST00000602140 VHLP40337 213 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 RPS11P62280 158 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPS28-204ENST00000602140 YIF1BQ5BJH7 314 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 AWAT2Q6E213 333 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 JAGN1Q8N5M9 183 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 MRPS24Q96EL2 167 aaKnown RBP10.29□□□□□ -0.76
RPS28-204ENST00000602140 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 PRR25Q96S07 402 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 BANF2Q9H503 90 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 SMPD3Q9NY59 655 aaPredicted RBP10.29□□□□□ -0.76
RPS28-204ENST00000602140 PEX16Q9Y5Y5 336 aa10.29□□□□□ -0.76
RPS28-204ENST00000602140 BAG2O95816 211 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms