RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 OR4A4PQ8NGN8 299 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 OR1L1Q8NH94 360 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 MAFIPQ8WZ33 124 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 SNAPC3Q92966 411 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
UPF1-211ENST00000600868 ONECUT1Q9UBC0 465 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 ANXA10Q9UJ72 324 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
UPF1-211ENST00000600868 SCTP09683 121 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 GSTT2P0CG29 244 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 GSTT2BP0CG30 244 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 GDNFP39905 211 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 Q8N7P7 452 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 OR52M1Q8NGK5 317 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 TRIM63Q969Q1 353 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 GALMQ96C23 342 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
UPF1-211ENST00000600868 TAS2R8Q9NYW2 309 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 IDI2-AS1Q9NZ38 188 aa11.78□□□□□ -0.52
UPF1-211ENST00000600868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.522e-10■■■■□ 22.1
UPF1-211ENST00000600868 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
UPF1-211ENST00000600868 J3QLI3 93 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 LANCL1O43813 399 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 MMP23AO75900 390 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 IGHV1-8P0DP01 117 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 MMP9P14780 707 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 PRTN3P24158 256 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 FPR2P25090 351 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 TAS2R46P59540 309 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 HTD2P86397 168 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 STEAP3Q658P3 488 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 OR52W1Q6IF63 320 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 LYSMD2Q8IV50 215 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 PRR18Q8N4B5 295 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 TMEM229BQ8NBD8 167 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 OR5AP2Q8NGF4 316 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 KIRREL1Q96J84 757 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
UPF1-211ENST00000600868 METTL8Q9H825 291 aaKnown RBP11.77□□□□□ -0.53
UPF1-211ENST00000600868 IGKV1-6A0A0C4DH72 117 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 CD5LO43866 347 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 TOX4O94842 621 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 FCER2P06734 321 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 CSF1P09603 554 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 FOSL1P15407 271 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
UPF1-211ENST00000600868 TBPP20226 339 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 OMGP23515 440 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 LOXL3P58215 753 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 TAS2R19P59542 299 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 ARPC4P59998 168 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 ERVFRD-1P60508 538 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 BAK1Q16611 211 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 IGSF11Q5DX21 431 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 PRAMEF5Q5TYX0 476 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 SESN1Q9Y6P5 492 aa11.76□□□□□ -0.53
UPF1-211ENST00000600868 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 A0A087X0M5 115 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 TRBV6-7A0A0A0MS04 114 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 A0A1B0GX30 115 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 ZNF736B4DX44 427 aaPredicted RBP11.75□□□□□ -0.53
UPF1-211ENST00000600868 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
UPF1-211ENST00000600868 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 AP3S2P59780 193 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 CDK10Q15131 360 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 Q3ZCU0 254 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 ACTBL2Q562R1 376 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 TRIQKQ629K1 86 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 IL1F10Q8WWZ1 152 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 TMPRSS13Q9BYE2 586 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 AUP1Q9Y679 476 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 WNK2Q9Y3S1 2297 aa11.75□□□□□ -0.53
UPF1-211ENST00000600868 ABCA1O95477 2261 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 J3QRK9 145 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 YPEL1O60688 119 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 CD74P04233 296 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 IL7P13232 177 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 CD99P14209 185 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms