RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TRAV39A0A0B4J263 110 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 TCRBV4S1A1TA0A5B7 111 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 OOSP1A8MZH6 123 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 M0QZK8 103 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 MPIG6BO95866 241 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 GTF2F2P13984 249 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 MGMTP16455 207 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 C1orf100Q5SVJ3 147 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 SYT6Q5T7P8 510 aaPredicted RBP14.94□□□□□ -0.02
PNKP-213ENST00000599543 HES5Q5TA89 166 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 SUMF2Q8NBJ7 301 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 OR4X2Q8NGF9 303 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 OR9G1Q8NH87 305 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 PLPPR1Q8TBJ4 325 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 TOMM40LQ969M1 308 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 RPEQ96AT9 228 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 PHF21AQ96BD5 680 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 KIRREL1Q96J84 757 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 CHCHD6Q9BRQ6 235 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 BARHL1Q9BZE3 327 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 PCDHB16Q9NRJ7 776 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 CALYQ9NYX4 217 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 KIF25Q9UIL4 384 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 TSSC4Q9Y5U2 329 aaPredicted RBP14.94□□□□□ -0.02
PNKP-213ENST00000599543 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
PNKP-213ENST00000599543 LOC100506127A0A0U1RQW1 187 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 LY6LH3BQJ8 138 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 PF4P02776 101 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 VSIG8P0DPA2 414 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 CD36P16671 472 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 MYL9P24844 172 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 HTR2CP28335 458 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 TXNL4BQ9NX01 149 aaKnown RBP14.93□□□□□ -0.02
PNKP-213ENST00000599543 STUB1Q9UNE7 303 aa14.93□□□□□ -0.02
PNKP-213ENST00000599543 A0A0B4J203 849 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 SLC22A1O15245 554 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 ZNF780AO75290 641 aaPredicted RBP14.92□□□□□ -0.02
PNKP-213ENST00000599543 FAM106CPP0CH98 169 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 PLA2G7Q13093 441 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 GPR176Q14439 515 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 RAB11BQ15907 218 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 KHDC1LQ5JSQ8 128 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 C9orf152Q5JTZ5 239 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 UTF1Q5T230 341 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 OR13A1Q8NGR1 328 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 NEK7Q8TDX7 302 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 DPCDQ9BVM2 203 aaPredicted RBP14.92□□□□□ -0.02
PNKP-213ENST00000599543 SSR3Q9UNL2 185 aa14.92□□□□□ -0.02
PNKP-213ENST00000599543 SH2D7A6NKC9 451 aaPredicted RBP14.91□□□□□ -0.02
PNKP-213ENST00000599543 SLC17A2O00624 439 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 IL1AP01583 271 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 IGHV3-7P01780 117 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 AMY1AP04745 511 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 AMY2AP04746 511 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 SMIM18P0DKX4 95 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 TGFBR1P36897 503 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 KCNJ3P48549 501 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 UNC119Q13432 240 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 TCTEX1D4Q5JR98 221 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 NHLRC3Q5JS37 347 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 NR2C2APQ86WQ0 139 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 OR51D1Q8NGF3 324 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 OR6M1Q8NGM8 313 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 MRGPRDQ8TDS7 321 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 LEAP2Q969E1 77 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 NICN1Q9BSH3 213 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 NCOR1P1Q9H4R4 102 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 AURKAIP1Q9NWT8 199 aaPredicted RBP14.91□□□□□ -0.02
PNKP-213ENST00000599543 IDI2-AS1Q9NZ38 188 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 MOB4Q9Y3A3 225 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 V9GY05 133 aa14.91□□□□□ -0.02
PNKP-213ENST00000599543 J3QR06 171 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 CLEC2LP0C7M8 214 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 CGB3P0DN86 165 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 CGB7P0DN87 165 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 CD37P11049 281 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 IGLL1P15814 213 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 LOXL3P58215 753 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 PAX5Q02548 391 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 MADCAM1Q13477 382 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 LTC4SQ16873 150 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 RSBN1Q5VWQ0 802 aaPredicted RBP14.9□□□□□ -0.02
PNKP-213ENST00000599543 FOXB2Q5VYV0 432 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 WFDC9Q8NEX5 89 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 OR56B4Q8NH76 319 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 Q96M66 194 aa14.9□□□□□ -0.02
PNKP-213ENST00000599543 TRAV1-2A0A0B4J238 106 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 UBE2QL1A1L167 161 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 SNRNP70P08621 437 aaKnown RBP14.89□□□□□ -0.03
PNKP-213ENST00000599543 SLC2A2P11168 524 aaPredicted RBP14.89□□□□□ -0.03
PNKP-213ENST00000599543 RAB3BP20337 219 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 GNG10P50151 68 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 LSM3P62310 102 aaKnown RBP14.89□□□□□ -0.03
PNKP-213ENST00000599543 QRFPP83859 136 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 MXD1Q05195 221 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 HES1Q14469 280 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 MPV17LQ2QL34 196 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 NKAPLQ5M9Q1 402 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 SIGIRRQ6IA17 410 aa14.89□□□□□ -0.03
PNKP-213ENST00000599543 RAB12Q6IQ22 244 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms