RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PSPNO60542 156 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 PDCD6O75340 191 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 FCN3O75636 299 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 S100A5P33763 92 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ETV6P41212 452 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ARF6P62330 175 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 IKZF1Q13422 519 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF260Q3ZCT1 412 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 CNIH2Q6PI25 160 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF841Q6ZN19 808 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ST8SIA4Q92187 359 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 MED30Q96HR3 178 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 CCL13Q99616 98 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 PECRQ9BY49 303 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 DIABLOQ9NR28 239 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 ADAM30Q9UKF2 790 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 KCNK7Q9Y2U2 307 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 DSCAML1Q8TD84 2053 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 A0A1B0GW55 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 K7N7A8 449 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 SIRPB1O00241 398 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 MFNGO00587 321 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 HLA-DQB1P01920 261 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L2P0CJ85 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L3P0CJ86 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L4P0CJ87 422 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L5P0CJ88 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L6P0CJ89 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L7P0CJ90 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF44P15621 663 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 GABRA2P47869 451 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 PAX5Q02548 391 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 SCN1BQ07699 218 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 LY6EQ16553 131 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 C11orf88Q6PI97 169 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4L9Q6RFH8 374 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 SNX22Q96L94 193 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 FAM234AQ9H0X4 552 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 EXTL2Q9UBQ6 330 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 CTSZQ9UBR2 303 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 DUX4Q9UBX2 424 aa11.25□□□□□ -0.61
SHKBP1-218ENST00000598907 TRAV18A0A075B6X5 111 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 ADAM20O43506 726 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 CA11O75493 328 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 TK1P04183 234 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 CSN2P05814 226 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 OR3A1P47881 315 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 TAS2R20P59543 309 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 ARL6IP1Q15041 203 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 ATAD3CQ5T2N8 411 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 CD276Q5ZPR3 534 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 SLC36A1Q7Z2H8 476 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 C6orf201Q7Z4U5 140 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 GAPTQ8N292 157 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 FAM216BQ8N7L0 139 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNRF1Q8ND25 227 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 NEDD4LQ96PU5 975 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 CITED2Q99967 270 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 AUNIPQ9H7T9 357 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 PLEKHJ1Q9NW61 149 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 RABL2AQ9UBK7 228 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 RABL2BQ9UNT1 228 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 V9GYH0 126 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
SHKBP1-218ENST00000598907 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 MCRIP1C9JLW8 97 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 LIPFP07098 398 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 GSTP1P09211 210 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 SELLP14151 372 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 GNB3P16520 340 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 PTBP1P26599 531 aaKnown RBP eCLIP11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 TALDO1P37837 337 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 KCNJ3P48549 501 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 LSAMPQ13449 338 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 RBM39Q14498 530 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 PNLIPRP3Q17RR3 467 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 PAN3Q58A45 887 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 TMEM69Q5SWH9 247 aa11.23□□□□□ -0.61
SHKBP1-218ENST00000598907 BAIAP2L2Q6UXY1 529 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms