RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RHOXF1Q8NHV9 184 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 CHCHD6Q9BRQ6 235 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 LSM4Q9Y4Z0 139 aaKnown RBP13.37□□□□□ -0.27
PNKP-210ENST00000597965 SEC14L6B5MCN3 397 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 SDCBPO00560 298 aaPredicted RBP13.36□□□□□ -0.27
PNKP-210ENST00000597965 GABRPO00591 440 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
PNKP-210ENST00000597965 OR7C1O76099 320 aaPredicted RBP13.36□□□□□ -0.27
PNKP-210ENST00000597965 HTR3BO95264 441 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
PNKP-210ENST00000597965 GABRB1P18505 474 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 INSL3P51460 131 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 TMEM30BQ3MIR4 351 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 PIGYQ3MUY2 71 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 NHLRC3Q5JS37 347 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 ASCL4Q6XD76 172 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 APH1BQ8WW43 257 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 RTN4IP1Q8WWV3 396 aaPredicted RBP13.36□□□□□ -0.27
PNKP-210ENST00000597965 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 AASSQ9UDR5 926 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 ST3GAL6Q9Y274 331 aa13.36□□□□□ -0.27
PNKP-210ENST00000597965 ORC5O43913 435 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
PNKP-210ENST00000597965 SOX6P35712 828 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 ECI1P42126 302 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 GABARAPL2P60520 117 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 PPP3R1P63098 170 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 RAB40BQ12829 278 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 MPV17LQ2QL34 196 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 ZNF529Q6P280 563 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 ZNF773Q6PK81 442 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 STX19Q8N4C7 294 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 Q8N6K4 173 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 Q8N9W7 124 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 ARL11Q969Q4 196 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 LGALS12Q96DT0 336 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 S1PR3Q99500 378 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 PDCD1LG2Q9BQ51 273 aa13.35□□□□□ -0.27
PNKP-210ENST00000597965 IGHG4P01861 327 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 REG1BP48304 166 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 LUMP51884 338 aaPredicted RBP13.34□□□□□ -0.27
PNKP-210ENST00000597965 RBM11P57052 281 aaKnown RBP13.34□□□□□ -0.27
PNKP-210ENST00000597965 BPIFB6Q8NFQ5 453 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 GPR148Q8TDV2 347 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 DUSP21Q9H596 190 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 ISG20L2Q9H9L3 353 aaKnown RBP13.34□□□□□ -0.27
PNKP-210ENST00000597965 SPACA1Q9HBV2 294 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 BLOC1S6Q9UL45 172 aa13.34□□□□□ -0.27
PNKP-210ENST00000597965 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 A0A1W2PPE3 182 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 SPINT2O43291 252 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 IGF1P05019 195 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 CHATP28329 748 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 ZNF93P35789 620 aaPredicted RBP13.33□□□□□ -0.28
PNKP-210ENST00000597965 GPR176Q14439 515 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 CCDC58Q4VC31 144 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 TMEM65Q6PI78 240 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 TMEM104Q8NE00 496 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 OR51A2Q8NGJ7 313 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 OR10K1Q8NGX5 313 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 NEK7Q8TDX7 302 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 PLCXD1Q9NUJ7 323 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 ERVK13-1Q9NX77 482 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 GFOD1Q9NXC2 390 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 ING4Q9UNL4 249 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
PNKP-210ENST00000597965 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.28
PNKP-210ENST00000597965 SMIM31A0A1B0GVY4 71 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 LINC01548A6NM66 108 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 OR8U8P0C7N1 319 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 GTF2F2P13984 249 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 ZNF137PP52743 207 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
PNKP-210ENST00000597965 DEFB136Q30KP8 78 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 ATAD3CQ5T2N8 411 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 STEAP3Q658P3 488 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 TRAT1Q6PIZ9 186 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 TMEM106AQ96A25 262 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 PRR25Q96S07 402 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 PLSCR3Q9NRY6 295 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 SCN3BQ9NY72 215 aa13.32□□□□□ -0.28
PNKP-210ENST00000597965 RPL36Q9Y3U8 105 aaKnown RBP13.32□□□□□ -0.28
PNKP-210ENST00000597965 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 AIPO00170 330 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
PNKP-210ENST00000597965 MRPS14O60783 128 aaKnown RBP13.31□□□□□ -0.28
PNKP-210ENST00000597965 PSMB8P28062 276 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 SOX2P48431 317 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 FHL3Q13643 280 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms