RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	LALBA	P00709	142 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	F2RL1	P55085	397 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	FOXE3	Q13461	319 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	RIPK1	Q13546	671 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	MPV17L	Q2QL34	196 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	CCDC58	Q4VC31	144 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	CXorf66	Q5JRM2	361 aa	Predicted RBP	8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	LINC00596	Q86U02	117 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	PRR18	Q8N4B5	295 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	ZFP41	Q8N8Y5	198 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	C8orf31	Q8N9H6	132 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	PRR25	Q96S07	402 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	S1PR3	Q99500	378 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	S100A13	Q99584	98 aa		8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	8.25	□□□□□ -1.09
LSM4-205	ENST00000597776	OGG1	O15527	345 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	ORC5	O43913	435 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	GTF2F2	P13984	249 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	IGFBP3	P17936	291 aa	Predicted RBP	8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	MYF6	P23409	242 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	IL3RA	P26951	378 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	CD1B	P29016	333 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF134	P52741	427 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	CFHR3	Q02985	330 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	DCTN2	Q13561	401 aa	Known RBP	8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	KIR2DS1	Q14954	304 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	CT45A1	Q5HYN5	189 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	SYT6	Q5T7P8	510 aa	Predicted RBP	8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	TMPRSS11A	Q6ZMR5	421 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	SLC25A48	Q6ZT89	311 aa	Known RBP	8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	PQLC1	Q8N2U9	271 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	STX19	Q8N4C7	294 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	FAM71E2	Q8N5Q1	922 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	RNF152	Q8N8N0	203 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF439	Q8NDP4	499 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	OR5M8	Q8NGP6	311 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	OR8U1	Q8NH10	309 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	OR4K15	Q8NH41	348 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	OR1L1	Q8NH94	360 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	CT45A3	Q8NHU0	189 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	GHSR	Q92847	366 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	MUL1	Q969V5	352 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	SMIM19	Q96E16	107 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	RASL11B	Q9BPW5	248 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	GNG12	Q9UBI6	72 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	CLEC2D	Q9UHP7	191 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	TRAPPC2L	Q9UL33	140 aa		8.24	□□□□□ -1.09
LSM4-205	ENST00000597776	TRBV5-5	A0A0J9YX44	114 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776		A0A1W2PPK0	400 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	SEC14L6	B5MCN3	397 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	MCRIP1	C9JLW8	97 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	SPINT2	O43291	252 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	RRP9	O43818	475 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF780A	O75290	641 aa	Predicted RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	IGHG4	P01861	327 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	HBZ	P02008	142 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ELANE	P08246	267 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	SLC2A2	P11168	524 aa	Predicted RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	RCC1	P18754	421 aa	Predicted RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	VDAC1	P21796	283 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	DCK	P27707	260 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	SOX6	P35712	828 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	VHL	P40337	213 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ECI1	P42126	302 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	CDX1	P47902	265 aa	Predicted RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF137P	P52743	207 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	GP2	P55259	537 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	RPS11	P62280	158 aa	Known RBP eCLIP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ADARB1	P78563	741 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	GNMT	Q14749	295 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	NKAPL	Q5M9Q1	402 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	DMKN	Q6E0U4	476 aa	Predicted RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	RAB12	Q6IQ22	244 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	C5orf24	Q7Z6I8	188 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	JAGN1	Q8N5M9	183 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	KCTD7	Q96MP8	289 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	GON7	Q9BXV9	100 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	BANF2	Q9H503	90 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	S100A14	Q9HCY8	104 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	BABAM2	Q9NXR7	383 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ETAA1	Q9NY74	926 aa		8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	RCC2	Q9P258	522 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	ZMAT5	Q9UDW3	170 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	MRPS28	Q9Y2Q9	187 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	LSM4	Q9Y4Z0	139 aa	Known RBP	8.23	□□□□□ -1.09
LSM4-205	ENST00000597776	PNMA8C	A0A1B0GUJ8	204 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	TXNL1	O43396	289 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	RAMP3	O60896	148 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	MYL12A	P19105	171 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	PSMB8	P28062	276 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	LSAMP	Q13449	338 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776		Q3ZCU0	254 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776		Q499Y3	187 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	C6orf183	Q5T699	404 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	C9orf66	Q5T8R8	295 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	AWAT2	Q6E213	333 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	GLIPR1L1	Q6UWM5	242 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF555	Q8NEP9	628 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	OR8H1	Q8NGG4	311 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	C4orf3	Q8WVX3	66 aa		8.22	□□□□□ -1.09

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