RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LPAR5Q9H1C0 372 aa16.94■□□□□ 0.3
PNKP-209ENST00000596726 PSMB9P28065 219 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 KCTD21Q4G0X4 260 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 C6orf183Q5T699 404 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 TRAT1Q6PIZ9 186 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 FAM89BQ8N5H3 189 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 OR4C13Q8NGP0 309 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 UBALD1Q8TB05 177 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 MRPL30Q8TCC3 161 aaKnown RBP16.93■□□□□ 0.3
PNKP-209ENST00000596726 NEDD4LQ96PU5 975 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 CITED1Q99966 193 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 NPFFR1Q9GZQ6 430 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 GFOD1Q9NXC2 390 aa16.93■□□□□ 0.3
PNKP-209ENST00000596726 AMMECR1Q9Y4X0 333 aaPredicted RBP16.93■□□□□ 0.3
PNKP-209ENST00000596726 SDCBPO00560 298 aaPredicted RBP16.92■□□□□ 0.3
PNKP-209ENST00000596726 RCC1P18754 421 aaPredicted RBP16.92■□□□□ 0.3
PNKP-209ENST00000596726 BRS3P32247 399 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 GNG10P50151 68 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 NKAPLQ5M9Q1 402 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 C6orf201Q7Z4U5 140 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 LINC00311Q8N616 119 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 OR51D1Q8NGF3 324 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 TRRAPQ9Y4A5 3859 aa16.92■□□□□ 0.3
PNKP-209ENST00000596726 FOXI3A8MTJ6 420 aaPredicted RBP16.91■□□□□ 0.3
PNKP-209ENST00000596726 PDCD5O14737 125 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 LDLRAD4O15165 306 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 BLVRBP30043 206 aaPredicted RBP16.91■□□□□ 0.3
PNKP-209ENST00000596726 FGF9P31371 208 aaPredicted RBP16.91■□□□□ 0.3
PNKP-209ENST00000596726 RANBP1P43487 201 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 ARHGDIBP52566 201 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 EFNB2P52799 333 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 CLDN12P56749 244 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 C2orf76Q3KRA6 126 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 TMEM30BQ3MIR4 351 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 Q3ZCU0 254 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 FAM53AQ6NSI3 398 aaPredicted RBP16.91■□□□□ 0.3
PNKP-209ENST00000596726 CCDC144NLQ6NUI1 221 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 ZNF554Q86TJ5 538 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 C8orf31Q8N9H6 132 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 DTX3Q8N9I9 347 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 FAM3DQ96BQ1 224 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 URM1Q9BTM9 101 aaKnown RBP16.91■□□□□ 0.3
PNKP-209ENST00000596726 FAAP24Q9BTP7 215 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 ZNF696Q9H7X3 374 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 RAB9BQ9NP90 201 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 STEAP1Q9UHE8 339 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 PKD1L1Q8TDX9 2849 aa16.91■□□□□ 0.3
PNKP-209ENST00000596726 IGHV3-43A0A0B4J1X8 118 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 A0A1W2PPE3 182 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 SOCS1O15524 211 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 SPINT2O43291 252 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 HBZP02008 142 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 IGHV3-43DP0DP04 118 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 MYL9P24844 172 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 CD24P25063 80 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 OR10A3P58181 314 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 MADCAM1Q13477 382 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 HES5Q5TA89 166 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 C22orf42Q6IC83 251 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 Q8N2B8 174 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 OR1L1Q8NH94 360 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 RPEQ96AT9 228 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 ZNF702PQ9H963 129 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 TAF9BQ9HBM6 251 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 SIGLEC9Q9Y336 463 aa16.9■□□□□ 0.3
PNKP-209ENST00000596726 FAM90A9PA6NNJ1 464 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 MNDAP41218 407 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 TMEM50BP56557 158 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 DIAPH2-AS1Q14236 149 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 FBLN7Q53RD9 439 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 PRR31Q5SQ13 230 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 C11orf88Q6PI97 169 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 C16orf82Q7Z2V1 217 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 ZNF439Q8NDP4 499 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 OR10X1Q8NGY0 326 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 OR2T6Q8NHC8 308 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 TOMM40LQ969M1 308 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 OCSTAMPQ9BR26 566 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 TXNL4BQ9NX01 149 aaKnown RBP16.89■□□□□ 0.29
PNKP-209ENST00000596726 STUB1Q9UNE7 303 aa16.89■□□□□ 0.29
PNKP-209ENST00000596726 TMEM272A0A1B0GTI8 110 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 A0A1W2PPI3 338 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 IFITM5A6NNB3 132 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 NAPSAO96009 420 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 RAB3BP20337 219 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 RAB7AP51149 207 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 ZNF880Q6PDB4 577 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 NR2C2APQ86WQ0 139 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 THNSL2Q86YJ6 484 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 OR8H3Q8N146 312 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 CFHR4Q92496 578 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 LIN7BQ9HAP6 207 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 PLEKHJ1Q9NW61 149 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 KCNIP1Q9NZI2 227 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 HSF4Q9ULV5 492 aa16.88■□□□□ 0.29
PNKP-209ENST00000596726 NBEAL1Q6ZS30 2694 aa16.87■□□□□ 0.29
PNKP-209ENST00000596726 BLCAPP62952 87 aa16.87■□□□□ 0.29
PNKP-209ENST00000596726 ZNF816Q0VGE8 651 aaPredicted RBP16.87■□□□□ 0.29
PNKP-209ENST00000596726 PLA2G7Q13093 441 aa16.87■□□□□ 0.29
PNKP-209ENST00000596726 Q6ZPA2 131 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms