RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ABCB10Q9NRK6 738 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 FBLN5Q9UBX5 448 aa8.82□□□□□ -1
SHKBP1-206ENST00000595523 IGHV3-43A0A0B4J1X8 118 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 TRAV1-2A0A0B4J238 106 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 A0A1W2PPE3 182 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 F2RL2O00254 374 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 CCRL2O00421 344 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 LDLRAD4O15165 306 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 IGHV3-43DP0DP04 118 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 GALP22466 123 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 PSMB9P28065 219 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 KIR2DS4P43632 304 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 GNG10P50151 68 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 EFNB2P52799 333 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 PRRX1P54821 245 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 RAB11BQ15907 218 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 NKAPLQ5M9Q1 402 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 C22orf42Q6IC83 251 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 Q6ZS46 218 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 OR2W3Q7Z3T1 314 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 NR2C2APQ86WQ0 139 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 FAM89BQ8N5H3 189 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 OR51D1Q8NGF3 324 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 OR52M1Q8NGK5 317 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 OR1L1Q8NH94 360 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 FAAP24Q9BTP7 215 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 RANBP3Q9H6Z4 567 aaPredicted RBP8.81□□□□□ -1
SHKBP1-206ENST00000595523 ZNF702PQ9H963 129 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 RAB18Q9NP72 206 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 MBNL3Q9NUK0 354 aaKnown RBP8.81□□□□□ -1
SHKBP1-206ENST00000595523 GFOD1Q9NXC2 390 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 TRAPPC2LQ9UL33 140 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 V9GY05 133 aa8.81□□□□□ -1
SHKBP1-206ENST00000595523 A0A1W2PPI3 338 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 SDCBPO00560 298 aaPredicted RBP8.8□□□□□ -1
SHKBP1-206ENST00000595523 SLC31A2O15432 143 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 SOCS1O15524 211 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 CA11O75493 328 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 HBZP02008 142 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 ARSBP15848 533 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 CEACAM3P40198 252 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 HABP2Q14520 560 aaPredicted RBP8.8□□□□□ -1
SHKBP1-206ENST00000595523 KCTD21Q4G0X4 260 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 HES5Q5TA89 166 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 SLC16A12Q6ZSM3 486 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 Q8N2B8 174 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 ZNF439Q8NDP4 499 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 OR4C13Q8NGP0 309 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 CFHR4Q92496 578 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 FCGR1BQ92637 280 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 CREB3L1Q96BA8 519 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 FAM3DQ96BQ1 224 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
SHKBP1-206ENST00000595523 A0A0B4J203 849 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 TMEM272A0A1B0GTI8 110 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 IFITM5A6NNB3 132 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 FAM90A9PA6NNJ1 464 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 OOSP1A8MZH6 123 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 NAPSAO96009 420 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 BLVRBP30043 206 aaPredicted RBP8.79□□□□□ -1
SHKBP1-206ENST00000595523 FGF9P31371 208 aaPredicted RBP8.79□□□□□ -1
SHKBP1-206ENST00000595523 ZNF134P52741 427 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 TMEM50BP56557 158 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 BLCAPP62952 87 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 MADCAM1Q13477 382 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 GNMTQ14749 295 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 C2orf76Q3KRA6 126 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 PRR31Q5SQ13 230 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 C6orf183Q5T699 404 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 PRR18Q8N4B5 295 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 LINC00311Q8N616 119 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 C8orf31Q8N9H6 132 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 SGMS2Q8NHU3 365 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 TOMM40LQ969M1 308 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 ST6GALNAC6Q969X2 333 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 NEDD4LQ96PU5 975 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 ZNF696Q9H7X3 374 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 TAF9BQ9HBM6 251 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 SERTAD4Q9NUC0 356 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 TXNL4BQ9NX01 149 aaKnown RBP8.79□□□□□ -1
SHKBP1-206ENST00000595523 STEAP1Q9UHE8 339 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 PITPNC1Q9UKF7 332 aa8.79□□□□□ -1
SHKBP1-206ENST00000595523 AMMECR1Q9Y4X0 333 aaPredicted RBP8.79□□□□□ -1
SHKBP1-206ENST00000595523 SMIM30A4D0T7 59 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 H3BUI4 141 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 TIMM23O14925 209 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 SPINT2O43291 252 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 AMY1AP04745 511 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 AMY2AP04746 511 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 RAB3BP20337 219 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 MYL9P24844 172 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 BRS3P32247 399 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 HMGN3Q15651 99 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 CT45A1Q5HYN5 189 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 PLAC9Q5JTB6 97 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 HIST2H2BDQ6DRA6 164 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 CCDC144NLQ6NUI1 221 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 ZNF880Q6PDB4 577 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 TRAT1Q6PIZ9 186 aa8.78□□□□□ -1
SHKBP1-206ENST00000595523 SLC25A48Q6ZT89 311 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms