RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 GABARAPL2P60520 117 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
TRIM28-205ENST00000595028 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 OR10K2Q6IF99 312 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 Q6ZTK2 550 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 CYYR1Q96J86 154 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 SLC25A33Q9BSK2 321 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 TMEM59Q9BXS4 323 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 MMP27Q9H306 513 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 GFOD1Q9NXC2 390 aa12.09□□□□□ -0.47
TRIM28-205ENST00000595028 A0A1W2PPE3 182 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 A0A1W2PPI3 338 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 OR2F2O95006 317 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 BPNT1O95861 308 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 VSIG10L2P0DP72 767 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 LOXL3P58215 753 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 BLCAPP62952 87 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 UNC119Q13432 240 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 C2orf68Q2NKX9 166 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
TRIM28-205ENST00000595028 Q6ZS46 218 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 LINC00311Q8N616 119 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 C8orf31Q8N9H6 132 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 OR10X1Q8NGY0 326 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 OR4K15Q8NH41 348 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 KCNG3Q8TAE7 436 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 CFHR4Q92496 578 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 GFI1Q99684 422 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 RAB9BQ9NP90 201 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 ACOT13Q9NPJ3 140 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 TRAPPC2LQ9UL33 140 aa12.08□□□□□ -0.48
TRIM28-205ENST00000595028 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 UBE2QL1A1L167 161 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 TMEM14DPA8MWL7 114 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 SLC17A2O00624 439 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 HSD17B6O14756 317 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 SPINT2O43291 252 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 TSPAN15O95858 294 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 IGHV3-43DP0DP04 118 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
TRIM28-205ENST00000595028 CHATP28329 748 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 RAB7AP51149 207 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 QRFPP83859 136 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 FABP5Q01469 135 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 DIAPH2-AS1Q14236 149 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 SSX1Q16384 188 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 Q3ZCU0 254 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 ARSJQ5FYB0 599 aaPredicted RBP12.07□□□□□ -0.48
TRIM28-205ENST00000595028 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 OR56B4Q8NH76 319 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 MRPL30Q8TCC3 161 aaKnown RBP12.07□□□□□ -0.48
TRIM28-205ENST00000595028 CAPSLQ8WWF8 208 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
TRIM28-205ENST00000595028 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 Q9H521 79 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 PLGRKTQ9HBL7 147 aa12.07□□□□□ -0.48
TRIM28-205ENST00000595028 FAM90A9PA6NNJ1 464 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 HBZP02008 142 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 VDAC2P45880 294 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 DRAM1Q8N682 238 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 C11orf44Q8N8P7 122 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 OR1L1Q8NH94 360 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 WIPF2Q8TF74 440 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 NEDD4LQ96PU5 975 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 SULT4A1Q9BR01 284 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 OCSTAMPQ9BR26 566 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 NICN1Q9BSH3 213 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 WNT10AQ9GZT5 417 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 MBNL3Q9NUK0 354 aaKnown RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 NDUFB11Q9NX14 153 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 GNG12Q9UBI6 72 aa12.06□□□□□ -0.48
TRIM28-205ENST00000595028 AK6Q9Y3D8 172 aaKnown RBP12.06□□□□□ -0.48
TRIM28-205ENST00000595028 M0QZK8 103 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 DENRO43583 198 aaKnown RBP12.05□□□□□ -0.48
TRIM28-205ENST00000595028 MRPS14O60783 128 aaKnown RBP12.05□□□□□ -0.48
TRIM28-205ENST00000595028 PEX14O75381 377 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 FBXO24O75426 580 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 SNRNP70P08621 437 aaKnown RBP12.05□□□□□ -0.48
TRIM28-205ENST00000595028 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 IL3RAP26951 378 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 EMX1Q04741 257 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-205ENST00000595028 P2RY14Q15391 338 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 RAB11BQ15907 218 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 PRR18Q8N4B5 295 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 SVOPQ8N4V2 548 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
TRIM28-205ENST00000595028 MOB4Q9Y3A3 225 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms