RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PSMB8P28062 276 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 SOX6P35712 828 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 ZNF93P35789 620 aaPredicted RBP12.76□□□□□ -0.37
LIG1-205ENST00000593425 VHLP40337 213 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 ZNF134P52741 427 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 RAB40BQ12829 278 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 MPV17LQ2QL34 196 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 KLHL22Q53GT1 634 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 LINC00596Q86U02 117 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 GPR148Q8TDV2 347 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 KCTD7Q96MP8 289 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 C12orf77C9JDV5 145 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 AIPO00170 330 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 ATP5HO75947 161 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 CD2P06729 351 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 ZNF137PP52743 207 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 Q3ZCU0 254 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 ASPHD1Q5U4P2 390 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
LIG1-205ENST00000593425 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 OR8H1Q8NGG4 311 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 OR10V1Q8NGI7 309 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 MYOZ3Q8TDC0 251 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 APH1BQ8WW43 257 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 TMEM138Q9NPI0 162 aa12.75□□□□□ -0.37
LIG1-205ENST00000593425 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
LIG1-205ENST00000593425 RYR2Q92736 4967 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 TXNL1O43396 289 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 IGF1P05019 195 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
LIG1-205ENST00000593425 MYF6P23409 242 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 BDKRB2P30411 391 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 PPP3R1P63098 170 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 SLC22A6Q4U2R8 563 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 CT45A1Q5HYN5 189 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 RPL22L1Q6P5R6 122 aaKnown RBP12.74□□□□□ -0.37
LIG1-205ENST00000593425 OR13C5Q8NGS8 318 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 CT45A3Q8NHU0 189 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 CYYR1Q96J86 154 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 Q96MT0 163 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 S100A13Q99584 98 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 KLK15Q9H2R5 256 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
LIG1-205ENST00000593425 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 ZNF107Q9UII5 783 aaPredicted RBP12.74□□□□□ -0.37
LIG1-205ENST00000593425 ZNF580Q9UK33 172 aa12.74□□□□□ -0.37
LIG1-205ENST00000593425 SIRT4Q9Y6E7 314 aaPredicted RBP12.74□□□□□ -0.37
LIG1-205ENST00000593425 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 CHATP28329 748 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 KIAA0141Q14154 515 aaPredicted RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 SYT6Q5T7P8 510 aaPredicted RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 OR1L1Q8NH94 360 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 ZNF184Q99676 751 aaPredicted RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
LIG1-205ENST00000593425 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
LIG1-205ENST00000593425 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 I3L521 148 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 LY86O95711 162 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 HBZP02008 142 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 GTF2F2P13984 249 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 IGFBP3P17936 291 aaPredicted RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 ETV1P50549 477 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 GNB1P62873 340 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 LSAMPQ13449 338 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 RIPK1Q13546 671 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 STX19Q8N4C7 294 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 OR5B12Q96R08 314 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 SLC29A1Q99808 456 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 PAK1IP1Q9NWT1 392 aaPredicted RBP12.72□□□□□ -0.37
LIG1-205ENST00000593425 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
LIG1-205ENST00000593425 LOC100130705A0A1B0GUX0 176 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 G3V318 75 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 ATP6V0E1O15342 81 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 SPINT2O43291 252 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 LALBAP00709 142 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 RCC1P18754 421 aaPredicted RBP12.71□□□□□ -0.37
LIG1-205ENST00000593425 CNTFRP26992 372 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
LIG1-205ENST00000593425 MMDQ15546 238 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 C5orf24Q7Z6I8 188 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 ZNF491Q8N8L2 437 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 OR1N2Q8NGR9 330 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 UBE2E2Q96LR5 201 aa12.71□□□□□ -0.37
LIG1-205ENST00000593425 ETAA1Q9NY74 926 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms