RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 GHSRQ92847 366 aa16.09■□□□□ 0.17
TRIM47-207ENST00000593089 ST6GALNAC6Q969X2 333 aa16.09■□□□□ 0.17
TRIM47-207ENST00000593089 B9D2Q9BPU9 175 aa16.09■□□□□ 0.17
TRIM47-207ENST00000593089 DCLRE1BQ9H816 532 aa16.09■□□□□ 0.17
TRIM47-207ENST00000593089 SMPD3Q9NY59 655 aaPredicted RBP16.09■□□□□ 0.17
TRIM47-207ENST00000593089 CLEC2DQ9UHP7 191 aa16.09■□□□□ 0.17
TRIM47-207ENST00000593089 KMT2CQ8NEZ4 4911 aaKnown RBP16.09■□□□□ 0.17
TRIM47-207ENST00000593089 COL7A1Q02388 2944 aa16.08■□□□□ 0.17
TRIM47-207ENST00000593089 TRBV5-5A0A0J9YX44 114 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 IRGMA1A4Y4 181 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 CCL24O00175 119 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 MOSP00540 346 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 CD1BP29016 333 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 GPR50Q13585 617 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 DEFB136Q30KP8 78 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 CXorf66Q5JRM2 361 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-207ENST00000593089 SYT6Q5T7P8 510 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-207ENST00000593089 PRR18Q8N4B5 295 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 ZFP41Q8N8Y5 198 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 OR10V1Q8NGI7 309 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 OR4K15Q8NH41 348 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 MUL1Q969V5 352 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 S1PR3Q99500 378 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 RASL11BQ9BPW5 248 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 GON7Q9BXV9 100 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 PLSCR3Q9NRY6 295 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 CKLFQ9UBR5 152 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 TRAPPC2LQ9UL33 140 aa16.08■□□□□ 0.16
TRIM47-207ENST00000593089 DIMT1Q9UNQ2 313 aaKnown RBP16.08■□□□□ 0.16
TRIM47-207ENST00000593089 EXOSC1Q9Y3B2 195 aaKnown RBP16.08■□□□□ 0.16
TRIM47-207ENST00000593089 TRAV8-7A0A075B6U6 113 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 C12orf77C9JDV5 145 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 MCRIP1C9JLW8 97 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 H0YHG0 523 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 BAG2O95816 211 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 DGCR2P98153 550 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 GPR176Q14439 515 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 Q499Y3 187 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 JAGN1Q8N5M9 183 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 TFAP2CQ92754 450 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 SPACA1Q9HBV2 294 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 ETAA1Q9NY74 926 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 GNG12Q9UBI6 72 aa16.07■□□□□ 0.16
TRIM47-207ENST00000593089 MRPS28Q9Y2Q9 187 aaKnown RBP16.07■□□□□ 0.16
TRIM47-207ENST00000593089 A0A1W2PPK0 400 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 SPINT2O43291 252 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 GPX5O75715 221 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 ZNF134P52741 427 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 RPS11P62280 158 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 Q3ZCU0 254 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 DMKNQ6E0U4 476 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 GLIPR1L1Q6UWM5 242 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 SLC25A48Q6ZT89 311 aaKnown RBP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 ZNF439Q8NDP4 499 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 OR8U1Q8NH10 309 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 RDH12Q96NR8 316 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 HSPB9Q9BQS6 159 aa16.06■□□□□ 0.16
TRIM47-207ENST00000593089 CHCHD3Q9NX63 227 aaKnown RBP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 RCC2Q9P258 522 aaKnown RBP16.06■□□□□ 0.16
TRIM47-207ENST00000593089 TXNL1O43396 289 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 HBZP02008 142 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 LUMP51884 338 aaPredicted RBP16.05■□□□□ 0.16
TRIM47-207ENST00000593089 F2RL1P55085 397 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 FOXE3Q13461 319 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 DCTN2Q13561 401 aaKnown RBP16.05■□□□□ 0.16
TRIM47-207ENST00000593089 YIF1BQ5BJH7 314 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 CT45A1Q5HYN5 189 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 C6orf183Q5T699 404 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 AWAT2Q6E213 333 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 RAB12Q6IQ22 244 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 OR1L1Q8NH94 360 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 CT45A3Q8NHU0 189 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 TMEM80Q96HE8 168 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 PGLYRP3Q96LB9 341 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 OR14A2Q96R54 314 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 BANF2Q9H503 90 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 RAB9BQ9NP90 201 aa16.05■□□□□ 0.16
TRIM47-207ENST00000593089 ZMAT5Q9UDW3 170 aaKnown RBP16.05■□□□□ 0.16
TRIM47-207ENST00000593089 PNMA8CA0A1B0GUJ8 204 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 MAS1P04201 325 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 ELANEP08246 267 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 FSTP19883 344 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 VDAC1P21796 283 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 SOX6P35712 828 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 MED21Q13503 144 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 KIR2DS1Q14954 304 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 FAM71E2Q8N5Q1 922 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 OR8H1Q8NGG4 311 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 OR5M8Q8NGP6 311 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 CYGBQ8WWM9 190 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 SELENOIQ9C0D9 397 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 PEX16Q9Y5Y5 336 aa16.04■□□□□ 0.16
TRIM47-207ENST00000593089 VSIG8P0DPA2 414 aa16.03■□□□□ 0.16
TRIM47-207ENST00000593089 RCC1P18754 421 aaPredicted RBP16.03■□□□□ 0.16
TRIM47-207ENST00000593089 CDX1P47902 265 aaPredicted RBP16.03■□□□□ 0.16
TRIM47-207ENST00000593089 ZNF137PP52743 207 aa16.03■□□□□ 0.16
TRIM47-207ENST00000593089 GP2P55259 537 aaKnown RBP16.03■□□□□ 0.16
TRIM47-207ENST00000593089 TMEM30BQ3MIR4 351 aa16.03■□□□□ 0.16
TRIM47-207ENST00000593089 MRPS24Q96EL2 167 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms