RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TMEM59Q9BXS4 323 aa21.8■■□□□ 1.08
SMAD4-213ENST00000591914 GFOD1Q9NXC2 390 aa21.8■■□□□ 1.08
SMAD4-213ENST00000591914 UBE2QL1A1L167 161 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 BPNT1O95861 308 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 SSX1Q16384 188 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 C6orf183Q5T699 404 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 Q6ZS46 218 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 Q6ZTK2 550 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 CFHR4Q92496 578 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 TM2D1Q9BX74 207 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 KCNK15Q9H427 330 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 CMYA5Q8N3K9 4069 aa21.79■■□□□ 1.08
SMAD4-213ENST00000591914 A0A1W2PPI3 338 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 TMEM14DPA8MWL7 114 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 DENRO43583 198 aaKnown RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 MRPS14O60783 128 aaKnown RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 OR2F2O95006 317 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 RCC1P18754 421 aaPredicted RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 CALRP27797 417 aaKnown RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 CHATP28329 748 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 EMX1Q04741 257 aaPredicted RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 DIAPH2-AS1Q14236 149 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 TMEM30BQ3MIR4 351 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 TRAT1Q6PIZ9 186 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 LINC00311Q8N616 119 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 OR10X1Q8NGY0 326 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 AKR1E2Q96JD6 320 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 RBM14Q96PK6 669 aaKnown RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 Q9H521 79 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 RAB9BQ9NP90 201 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 MBNL3Q9NUK0 354 aaKnown RBP21.78■■□□□ 1.08
SMAD4-213ENST00000591914 WNK1Q9H4A3 2382 aa21.78■■□□□ 1.08
SMAD4-213ENST00000591914 A0A1W2PPE3 182 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 FAM90A9PA6NNJ1 464 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 SLC17A2O00624 439 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 SPINT2O43291 252 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 VSIG10L2P0DP72 767 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 RAB7AP51149 207 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 Q3ZCU0 254 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 FAM53AQ6NSI3 398 aaPredicted RBP21.77■■□□□ 1.08
SMAD4-213ENST00000591914 NEDD4LQ96PU5 975 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 SLC25A33Q9BSK2 321 aa21.77■■□□□ 1.08
SMAD4-213ENST00000591914 AK6Q9Y3D8 172 aaKnown RBP21.77■■□□□ 1.08
SMAD4-213ENST00000591914 HBZP02008 142 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 NKAPLQ5M9Q1 402 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 THNSL2Q86YJ6 484 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 OR8H3Q8N146 312 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 MRPL30Q8TCC3 161 aaKnown RBP21.76■■□□□ 1.07
SMAD4-213ENST00000591914 SULT4A1Q9BR01 284 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 OCSTAMPQ9BR26 566 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 NICN1Q9BSH3 213 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 WNT10AQ9GZT5 417 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 PLGRKTQ9HBL7 147 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 NDUFB11Q9NX14 153 aa21.76■■□□□ 1.07
SMAD4-213ENST00000591914 MEGF8Q7Z7M0 2845 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 IGHV3-43A0A0B4J1X8 118 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 FAM106CPP0CH98 169 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 IGHV3-43DP0DP04 118 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 P2RY14Q15391 338 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 CD200R1LQ6Q8B3 271 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 OR2W3Q7Z3T1 314 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 ZNF554Q86TJ5 538 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 DRAM1Q8N682 238 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 OR56B4Q8NH76 319 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 OR1L1Q8NH94 360 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 WIPF2Q8TF74 440 aaPredicted RBP21.75■■□□□ 1.07
SMAD4-213ENST00000591914 CAPSLQ8WWF8 208 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 MMP27Q9H306 513 aa21.75■■□□□ 1.07
SMAD4-213ENST00000591914 TET2Q6N021 2002 aaPredicted RBP21.75■■□□□ 1.07
SMAD4-213ENST00000591914 HSD17B6O14756 317 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 ARSBP15848 533 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 ZNF816Q0VGE8 651 aaPredicted RBP21.74■■□□□ 1.07
SMAD4-213ENST00000591914 C2orf68Q2NKX9 166 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 C6orf201Q7Z4U5 140 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 SVOPQ8N4V2 548 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 TAF9BQ9HBM6 251 aa21.74■■□□□ 1.07
SMAD4-213ENST00000591914 TSPAN15O95858 294 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 AMY1AP04745 511 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 AMY2AP04746 511 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 SNRNP70P08621 437 aaKnown RBP21.73■■□□□ 1.07
SMAD4-213ENST00000591914 RAB11BQ15907 218 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 PRR18Q8N4B5 295 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 C11orf44Q8N8P7 122 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 ZNF439Q8NDP4 499 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 FAAP24Q9BTP7 215 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 YTHDF1Q9BYJ9 559 aaKnown RBP21.73■■□□□ 1.07
SMAD4-213ENST00000591914 LPAR5Q9H1C0 372 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 GNG12Q9UBI6 72 aa21.73■■□□□ 1.07
SMAD4-213ENST00000591914 A0A0A6YYD4 124 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 CCRL2O00421 344 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 VDAC2P45880 294 aaPredicted RBP21.72■■□□□ 1.07
SMAD4-213ENST00000591914 TMEM95Q3KNT9 176 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 ARSJQ5FYB0 599 aaPredicted RBP21.72■■□□□ 1.07
SMAD4-213ENST00000591914 UBE2UQ5VVX9 321 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 SLC25A48Q6ZT89 311 aaKnown RBP21.72■■□□□ 1.07
SMAD4-213ENST00000591914 SPARTQ8N0X7 666 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 FAM89BQ8N5H3 189 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 ST6GALNAC6Q969X2 333 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 KCNIP1Q9NZI2 227 aa21.72■■□□□ 1.07
SMAD4-213ENST00000591914 V9GY05 133 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms