RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PSMA1P25786 263 aaKnown RBP4.75□□□□□ -1.65
VMP1-208ENST00000588617 CNTFRP26992 372 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 INPP1P49441 399 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 FMODQ06828 376 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 TMEM31Q5JXX7 168 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 MRPL2Q5T653 305 aaKnown RBP4.75□□□□□ -1.65
VMP1-208ENST00000588617 C8orf74Q6P047 294 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 RASSF6Q6ZTQ3 369 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 NT5DC3Q86UY8 548 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 DOLPP1Q86YN1 238 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 NATD1Q8N6N6 113 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 OR9I1Q8NGQ6 314 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 ANKRD7Q92527 254 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 LINC00574Q9H8X3 128 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 IL37Q9NZH6 218 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 EMC3Q9P0I2 261 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 A0A1W2PP64 1363 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 IFT140Q96RY7 1462 aa4.75□□□□□ -1.65
VMP1-208ENST00000588617 EVC2Q86UK5 1308 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 DOCK9Q9BZ29 2069 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 BAZ2AQ9UIF9 1905 aaKnown RBP4.74□□□□□ -1.65
VMP1-208ENST00000588617 CUL7Q14999 1698 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 CLIP1P30622 1438 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 IZUMO1RA6ND01 250 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 TMEM114B3SHH9 223 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 MFNGO00587 321 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 DCTN3O75935 186 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 LHBP01229 141 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 IGHV1-46P01743 117 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 HLA-DRAP01903 254 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 MLNP12872 115 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 CTSEP14091 401 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 RAP1GDS1P52306 607 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 AP3S2P59780 193 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 CXCR4P61073 352 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 DAD1P61803 113 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 TRMT12Q53H54 448 aaKnown RBP4.74□□□□□ -1.65
VMP1-208ENST00000588617 LAIR2Q6ISS4 152 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 UNQ9165/PRO28630Q6UXU0 137 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 ZBTB8OSQ8IWT0 167 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 TMBIM1Q969X1 311 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 TLCD1Q96CP7 247 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 FAM60AQ9NP50 221 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 ABCA5Q8WWZ7 1642 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 CABIN1Q9Y6J0 2220 aa4.74□□□□□ -1.65
VMP1-208ENST00000588617 TP53BP1Q12888 1972 aaPredicted RBP4.74□□□□□ -1.65
VMP1-208ENST00000588617 C7orf66A4D0T2 115 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 ARGFXA6NJG6 315 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 COPEO14579 308 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 IL6P05231 212 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 ATP5G1P05496 136 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 TCL1AP56279 114 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 SLC35A2P78381 396 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 HPCAP84074 193 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 MESTQ5EB52 335 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 NAA40Q86UY6 237 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 EEF1AKMT1Q8WVE0 214 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
VMP1-208ENST00000588617 RBPMSQ93062 196 aaKnown RBP4.73□□□□□ -1.65
VMP1-208ENST00000588617 RTBDNQ9BSG5 229 aaPredicted RBP4.73□□□□□ -1.65
VMP1-208ENST00000588617 GAPVD1Q14C86 1478 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 NACAE9PAV3 2078 aa4.73□□□□□ -1.65
VMP1-208ENST00000588617 VPS8Q8N3P4 1428 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 TARBP1Q13395 1621 aaKnown RBP4.72□□□□□ -1.65
VMP1-208ENST00000588617 TEX50A0A1B0GTY4 177 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 OR6C70A6NIJ9 312 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 B4DEV8 164 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 K7ERS5 55 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 MPV17P39210 176 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 GABARAPL2P60520 117 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 REEP5Q00765 189 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 FUT5Q11128 374 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 CLVS2Q5SYC1 327 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 TMEM144Q7Z5S9 345 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 SLC51BQ86UW2 128 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 TRAPPC5Q8IUR0 188 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 SPPL2BQ8TCT7 592 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 MAL2Q969L2 176 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 APOBEC3DQ96AK3 386 aaPredicted RBP4.72□□□□□ -1.65
VMP1-208ENST00000588617 GALMQ96C23 342 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 SHANK2-AS3Q9BTD1 123 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 PLA2G12AQ9BZM1 189 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 BCL2L14Q9BZR8 327 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 LINC00527Q9UJ94 153 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 DKKL1Q9UK85 242 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 POLR1DQ9Y2S0 133 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 HDGFL3Q9Y3E1 203 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 ERCC6Q03468 1493 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 KIF21AQ7Z4S6 1674 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 SVILO95425 2214 aa4.72□□□□□ -1.65
VMP1-208ENST00000588617 GRIN2BQ13224 1484 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 A0A1W2PQL4 384 aaPredicted RBP4.71□□□□□ -1.66
VMP1-208ENST00000588617 CDRT1O95170 752 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 CRYBA1P05813 215 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 CTXN2P0C2S0 81 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 MYL12AP19105 171 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 S100A5P33763 92 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 PFN3P60673 137 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms