RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 KIRREL1Q96J84 757 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 SUCNR1Q9BXA5 334 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 GON7Q9BXV9 100 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 RAB9BQ9NP90 201 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 DNAJB11Q9UBS4 358 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 DNHD1Q96M86 4753 aa8.72□□□□□ -1.01
LIG3-203ENST00000585370 TUBAL3A6NHL2 446 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 M0R233 179 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 MGST3O14880 152 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 WNT9BO14905 357 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 CD8AP01732 235 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 SCTP09683 121 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 PSG2P11465 335 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 MUC1P15941 1255 aaPredicted RBP8.71□□□□□ -1.02
LIG3-203ENST00000585370 GZMHP20718 246 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 AADACP22760 399 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 SRPXP78539 464 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 COL10A1Q03692 680 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 HMGN3Q15651 99 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 IGSF11Q5DX21 431 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 GSG1LQ6UXU4 331 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 Q6ZPA2 131 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 TGIF2LYQ8IUE0 185 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 C1orf87Q8N0U7 546 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 OR5T2Q8NGG2 359 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 PLPPR1Q8TBJ4 325 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 CASTOR1Q8WTX7 329 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 FAM216AQ8WUB2 273 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 CYYR1Q96J86 154 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 CHIAQ9BZP6 476 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 SLA2Q9H6Q3 261 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 GCM1Q9NP62 436 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 COMMD9Q9P000 198 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 PAIP2BQ9ULR5 123 aaKnown RBP8.71□□□□□ -1.02
LIG3-203ENST00000585370 RNF115Q9Y4L5 304 aa8.71□□□□□ -1.02
LIG3-203ENST00000585370 IGHV3-64DA0A0J9YX35 117 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 A6NNC1 897 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 GPR31O00270 319 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 BET1O15155 118 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 PSPNO60542 156 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 IFNA21P01568 189 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 RPS2P15880 293 aaKnown RBP8.7□□□□□ -1.02
LIG3-203ENST00000585370 NFYAP23511 347 aaPredicted RBP8.7□□□□□ -1.02
LIG3-203ENST00000585370 OR3A1P47881 315 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 H2BFSP57053 126 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 PIGPP57054 158 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 SUPT4H1P63272 117 aaKnown RBP8.7□□□□□ -1.02
LIG3-203ENST00000585370 BAMBIQ13145 260 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 LY6G6FQ5SQ64 297 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 CMTM1Q8IZ96 169 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 H1FOOQ8IZA3 346 aaPredicted RBP8.7□□□□□ -1.02
LIG3-203ENST00000585370 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 ZNF561Q8N587 486 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 LRTM2Q8N967 370 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 LINC01560Q8TB33 94 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 RTN4IP1Q8WWV3 396 aaPredicted RBP8.7□□□□□ -1.02
LIG3-203ENST00000585370 TOMM40LQ969M1 308 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 GALMQ96C23 342 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 PDCD10Q9BUL8 212 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 NMES1Q9C002 83 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 SLC5A7Q9GZV3 580 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 TOLLIPQ9H0E2 274 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 FXYD6Q9H0Q3 95 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 FAM234AQ9H0X4 552 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 DNTTIP1Q9H147 329 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 NAA60Q9H7X0 242 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 PPP1R3CQ9UQK1 317 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 OR2W1Q9Y3N9 320 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 PRR14LQ5THK1 2151 aa8.7□□□□□ -1.02
LIG3-203ENST00000585370 TRAV38-1A0A0B4J264 116 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 C5orf51A6NDU8 294 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 E7EQL1 145 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 SMLR1H3BR10 107 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 K7N7A8 449 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 RGS13O14921 159 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 MPPED1O15442 326 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 HSPA12AO43301 675 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ZNF737O75373 536 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 HEXAP06865 529 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 WNT2P09544 360 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 SLC25A4P12235 298 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 HOXB4P17483 251 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 RCC1P18754 421 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 PI3P19957 117 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 LUMP51884 338 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 FXYD4P59646 89 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ATXN7L3Q14CW9 347 aaPredicted RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 HERPUD1Q15011 391 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 SLC9A3R2Q15599 337 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 MSMO1Q15800 293 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 C2orf68Q2NKX9 166 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 CR1LQ2VPA4 569 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 KRBOX4Q5JUW0 171 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms