RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ORC5O43913 435 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 RAB25P57735 213 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 TTC23Q5W5X9 447 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 AWAT2Q6E213 333 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 LINC00311Q8N616 119 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 OR4K15Q8NH41 348 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 DUX3Q96PT4 197 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 BANF2Q9H503 90 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 SPACA1Q9HBV2 294 aa16.12■□□□□ 0.17
TOP3A-219ENST00000584887 C12orf77C9JDV5 145 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 MAS1P04201 325 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 FSTP19883 344 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 GPR12P47775 334 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 RPS11P62280 158 aaKnown RBP eCLIP16.11■□□□□ 0.17
TOP3A-219ENST00000584887 ST3GAL4Q11206 333 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 SYT6Q5T7P8 510 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-219ENST00000584887 RAB12Q6IQ22 244 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 COMMD1Q8N668 190 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 RTN4IP1Q8WWV3 396 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-219ENST00000584887 PGLYRP3Q96LB9 341 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 ZFP57Q9NU63 452 aa16.11■□□□□ 0.17
TOP3A-219ENST00000584887 TRBV5-7A0A0A0MS05 114 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 AP4M1O00189 453 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 MOSP00540 346 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 EBI3Q14213 229 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 C6orf183Q5T699 404 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 ZNF695Q8IW36 515 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 DHRSXQ8N5I4 330 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 OR1L1Q8NH94 360 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 GGHQ92820 318 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 RBMXL1Q96E39 390 aaKnown RBP16.1■□□□□ 0.17
TOP3A-219ENST00000584887 SELENOIQ9C0D9 397 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 RAB9BQ9NP90 201 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 LIN7CQ9NUP9 197 aaKnown RBP16.1■□□□□ 0.17
TOP3A-219ENST00000584887 RCC2Q9P258 522 aaKnown RBP16.1■□□□□ 0.17
TOP3A-219ENST00000584887 PEX16Q9Y5Y5 336 aa16.1■□□□□ 0.17
TOP3A-219ENST00000584887 ZNF736B4DX44 427 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-219ENST00000584887 GPX5O75715 221 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 CRTAPO75718 401 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-219ENST00000584887 HBZP02008 142 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 MYCNOSP40205 109 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 TAS2R43P59537 309 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 TEX38Q6PEX7 206 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 Q8N6K4 173 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 C8orf31Q8N9H6 132 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 Q8N9W7 124 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 ST6GALNAC6Q969X2 333 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 RASL11BQ9BPW5 248 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 MCRIP2Q9BUT9 160 aaKnown RBP16.09■□□□□ 0.17
TOP3A-219ENST00000584887 ABCG5Q9H222 651 aa16.09■□□□□ 0.17
TOP3A-219ENST00000584887 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 EFCAB10A6NFE3 127 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 MYL12BO14950 172 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 MGMTP16455 207 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 CD1BP29016 333 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 VHLP40337 213 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 EGFEM1PQ0D2K5 195 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 CXorf66Q5JRM2 361 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-219ENST00000584887 ZNF485Q8NCK3 441 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 TMEM104Q8NE00 496 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 TFAP2CQ92754 450 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 MRPS24Q96EL2 167 aaKnown RBP16.08■□□□□ 0.16
TOP3A-219ENST00000584887 DERL3Q96Q80 235 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 S1PR3Q99500 378 aa16.08■□□□□ 0.16
TOP3A-219ENST00000584887 RPLP1P05386 114 aaKnown RBP16.07■□□□□ 0.16
TOP3A-219ENST00000584887 RCC1P18754 421 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-219ENST00000584887 CELP19835 753 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 SLC6A1P30531 599 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 CAPGP40121 348 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 ADARB1P78563 741 aaKnown RBP16.07■□□□□ 0.16
TOP3A-219ENST00000584887 GPR50Q13585 617 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 PNLIPRP3Q17RR3 467 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 CT45A1Q5HYN5 189 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 SLC25A48Q6ZT89 311 aaKnown RBP16.07■□□□□ 0.16
TOP3A-219ENST00000584887 AHSA2Q719I0 299 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 ZNF439Q8NDP4 499 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 CT45A3Q8NHU0 189 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 FAM46BQ96A09 425 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 RAX2Q96IS3 184 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 P2RX4Q99571 388 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 GON7Q9BXV9 100 aa16.07■□□□□ 0.16
TOP3A-219ENST00000584887 CCL24O00175 119 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 TXNL1O43396 289 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
TOP3A-219ENST00000584887 FUT3P21217 361 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 RCN1Q15293 331 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 DEFB136Q30KP8 78 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 TMEM30BQ3MIR4 351 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 Q3ZCU0 254 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 NKAPLQ5M9Q1 402 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 VAX1Q5SQQ9 334 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 TRAT1Q6PIZ9 186 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 UNQ9370/PRO34162Q6UXP9 181 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 C8orf59Q8N0T1 100 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-219ENST00000584887 PACRGLQ8N7B6 248 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 CYYR1Q96J86 154 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 OR2S2Q9NQN1 319 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms