RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	HTR2C	P28335	458 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	GABARAPL2	P60520	117 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	BLCAP	P62952	87 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	RPS27A	P62979	156 aa	Known RBP	10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	QRFP	P83859	136 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	MADCAM1	Q13477	382 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	HERPUD1	Q15011	391 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	SSX1	Q16384	188 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	SYT6	Q5T7P8	510 aa	Predicted RBP	10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR4K15	Q8NH41	348 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	WIPF2	Q8TF74	440 aa	Predicted RBP	10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	CFHR4	Q92496	578 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	ARL11	Q969Q4	196 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	RPE	Q96AT9	228 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	TMEM59	Q9BXS4	323 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	PRSS22	Q9GZN4	317 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	ACOT13	Q9NPJ3	140 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760	GFOD1	Q9NXC2	390 aa		10.64	□□□□□ -0.71
SREBF1-223	ENST00000584760		A0A1W2PPE3	182 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	FAM90A9P	A6NNJ1	464 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	TMEM14DP	A8MWL7	114 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760		G3V4G9	280 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760		H3BUI4	141 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	SDCBP	O00560	298 aa	Predicted RBP	10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	SLC17A2	O00624	439 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	ARL6IP5	O75915	188 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR2F2	O95006	317 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	BPNT1	O95861	308 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	CHAT	P28329	748 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	MNDA	P41218	407 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	DIAPH2-AS1	Q14236	149 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	TMEM30B	Q3MIR4	351 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	C6orf183	Q5T699	404 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	LINC00311	Q8N616	119 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	C8orf31	Q8N9H6	132 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR10X1	Q8NGY0	326 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	MRPL30	Q8TCC3	161 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	RBM14	Q96PK6	669 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	SLC25A33	Q9BSK2	321 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	TM2D1	Q9BX74	207 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	WNT10A	Q9GZT5	417 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	MBNL3	Q9NUK0	354 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760	TRAPPC2L	Q9UL33	140 aa		10.63	□□□□□ -0.71
SREBF1-223	ENST00000584760		A0A0A6YYD4	124 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	IGHV3-43	A0A0B4J1X8	118 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	UBE2QL1	A1L167	161 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	DENR	O43583	198 aa	Known RBP	10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	AMY1A	P04745	511 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	AMY2A	P04746	511 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	CSF1	P09603	554 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	IGHV3-43D	P0DP04	118 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	VSIG10L2	P0DP72	767 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	RCC1	P18754	421 aa	Predicted RBP	10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	CALR	P27797	417 aa	Known RBP	10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	RAB7A	P51149	207 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	EMX1	Q04741	257 aa	Predicted RBP	10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	C2orf68	Q2NKX9	166 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	BEAN1	Q3B7T3	259 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	TMEM95	Q3KNT9	176 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760		Q3ZCU0	254 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	NKAPL	Q5M9Q1	402 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	TRAT1	Q6PIZ9	186 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760		Q6ZPA2	131 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760		Q6ZTK2	550 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR8H3	Q8N146	312 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	ZNF439	Q8NDP4	499 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR56B4	Q8NH76	319 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	KCNG3	Q8TAE7	436 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	AKR1E2	Q96JD6	320 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	SULT4A1	Q9BR01	284 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	NICN1	Q9BSH3	213 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	NDUFB11	Q9NX14	153 aa		10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	AK6	Q9Y3D8	172 aa	Known RBP	10.62	□□□□□ -0.71
SREBF1-223	ENST00000584760	HSD17B6	O14756	317 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	SPINT2	O43291	252 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	MRPS14	O60783	128 aa	Known RBP	10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	HBZ	P02008	142 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	SNRNP70	P08621	437 aa	Known RBP	10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	P2RY14	Q15391	338 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	CD200R1L	Q6Q8B3	271 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR2W3	Q7Z3T1	314 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	C6orf201	Q7Z4U5	140 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	ZNF554	Q86TJ5	538 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	THNSL2	Q86YJ6	484 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	DRAM1	Q8N682	238 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	C11orf44	Q8N8P7	122 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	OR1L1	Q8NH94	360 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	ST6GALNAC6	Q969X2	333 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	OCSTAMP	Q9BR26	566 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	LPAR5	Q9H1C0	372 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	PLGRKT	Q9HBL7	147 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	RAB9B	Q9NP90	201 aa		10.61	□□□□□ -0.71
SREBF1-223	ENST00000584760	NBEAL2	Q6ZNJ1	2754 aa		10.6	□□□□□ -0.71
SREBF1-223	ENST00000584760	SLC31A2	O15432	143 aa		10.6	□□□□□ -0.71
SREBF1-223	ENST00000584760	FAM106CP	P0CH98	169 aa		10.6	□□□□□ -0.71
SREBF1-223	ENST00000584760	VDAC2	P45880	294 aa	Predicted RBP	10.6	□□□□□ -0.71
SREBF1-223	ENST00000584760	ZNF137P	P52743	207 aa		10.6	□□□□□ -0.71
SREBF1-223	ENST00000584760	RAB11B	Q15907	218 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms