RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SULT1A2P50226 295 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 FOXF1Q12946 379 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 OR8G1Q15617 311 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 MUC15Q8N387 334 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 OR4K13Q8NH42 304 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 CHMP5Q9NZZ3 219 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 OR51B4Q9Y5P0 310 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 HSPE1-MOB4S4R3N1 261 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 CRB1P82279 1406 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 KMT2EQ8IZD2 1858 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 TRPM6Q9BX84 2022 aa2.3□□□□□ -2.04
SMARCE1-219ENST00000583294 DNMT1P26358 1616 aaKnown RBP2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 IGSF23A1L1A6 192 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 K7ERQ8 282 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 SYT1P21579 422 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 PAFAH1B3Q15102 231 aaKnown RBP2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 ZBTB6Q15916 424 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 EBLN2Q6P2I7 272 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 OR10P1Q8NGE3 313 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 SUN5Q8TC36 379 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 TREM1Q9NP99 234 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 WASHC3Q9Y3C0 194 aa2.29□□□□□ -2.04
SMARCE1-219ENST00000583294 TRPM3Q9HCF6 1732 aaPredicted RBP2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 A8MWP6 167 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 YKT6O15498 198 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 BRI3O95415 125 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 PSMD7P51665 324 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 GABARAPL2P60520 117 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 C1QTNF8P60827 252 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 BSPH1Q075Z2 132 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 GALMQ96C23 342 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 COMMD9Q9P000 198 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 FBXL3Q9UKT7 428 aa2.28□□□□□ -2.04
SMARCE1-219ENST00000583294 OTOFQ9HC10 1997 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 MYO5BQ9ULV0 1848 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 C17orf51A8MQB3 221 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 CRYGDP07320 174 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 SYCP1Q15431 976 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 TMEM249Q2WGJ8 235 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 SPIN4Q56A73 249 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 HENMT1Q5T8I9 393 aaKnown RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 SPNS3Q6ZMD2 512 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 ZBTB8OSQ8IWT0 167 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 SELENOHQ8IZQ5 122 aaKnown RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 C2orf73Q8N5S3 287 aaPredicted RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 CD200R1Q8TD46 325 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 RNASEH2CQ8TDP1 164 aaKnown RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 RORBQ92753 470 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 GTF2H4Q92759 462 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 TMEM56Q96MV1 263 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM210AQ96ND0 272 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 EBNA1BP2Q99848 306 aaKnown RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 AICDAQ9GZX7 198 aa2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 SAMHD1Q9Y3Z3 626 aaKnown RBP2.27□□□□□ -2.05
SMARCE1-219ENST00000583294 PTPRKQ15262 1439 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 KIAA0232Q92628 1395 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 LOC102725191A0A1B0GVB3 256 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 MPZL2O60487 215 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 USF2Q15853 346 aaPredicted RBP2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 CENPWQ5EE01 88 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 TTC33Q6PID6 262 aaPredicted RBP2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 Q6ZRU5 148 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 VN1R4Q7Z5H5 301 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 DNAAF3Q8N9W5 541 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 OR4P4Q8NGL7 312 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 SLC19A3Q9BZV2 496 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 C11orf49Q9H6J7 331 aa2.26□□□□□ -2.05
SMARCE1-219ENST00000583294 ICE1Q9Y2F5 2266 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 USP42Q9H9J4 1324 aaKnown RBP2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 TRGV4A0A0C4DH28 118 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 CYTH3O43739 400 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 OR4A8P0C604 315 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 CTSEP14091 401 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 CPMP14384 443 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 GADD45AP24522 165 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 PDGFRLQ15198 375 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 ANGPT1Q15389 498 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 MAPK14Q16539 360 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 XKRXQ6PP77 449 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 DOLPP1Q86YN1 238 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 GPR119Q8TDV5 335 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 CCDC12Q8WUD4 166 aaPredicted RBP2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 COL18A1P39060 1754 aa2.25□□□□□ -2.05
SMARCE1-219ENST00000583294 ITGB4P16144 1822 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 DENRO43583 198 aaKnown RBP2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 FBP1P09467 338 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 RD3LP0DJH9 198 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 P0DMU3 169 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM231AP0DMU4 169 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM231CP0DMU5 169 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 HTR4Q13639 388 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM229BQ4G0N7 80 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 ACSBG2Q5FVE4 666 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 RBM48Q5RL73 367 aaKnown RBP2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 MTERF4Q7Z6M4 381 aaKnown RBP2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 SYCE1Q8N0S2 351 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms