RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 M0QX08 132 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 PLPP3O14495 311 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CDIPTO14735 213 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 POLR3GO15318 223 aaPredicted RBP0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CRXO43186 299 aaPredicted RBP0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 SOX14O95416 240 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 EPPINO95925 133 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 SPNP16150 400 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 LCN1P31025 176 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 KCNJ3P48549 501 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 UBE2KP61086 200 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 TSPAN5P62079 268 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 VSNL1P62760 191 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 HBG1P69891 147 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 HBG2P69892 147 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 BAXQ07812 192 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 SSX6Q7RTT6 188 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 PDCL2Q8N4E4 241 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 SPICQ8N5J4 248 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CDRT4Q8N9R6 151 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 OR8G5Q8NG78 346 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 ZNRF2Q8NHG8 242 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 TMEM239Q8WW34 195 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 NELFBQ8WX92 580 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CAPZA3Q96KX2 299 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CIB1Q99828 191 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 COPS4Q9BT78 406 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 TAPBPLQ9BX59 468 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 OR52A5Q9H2C5 316 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 CHMP4BQ9H444 224 aaKnown RBP0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 MINOS1-NBL1R4GNA1 71 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 RGS12O14924 1447 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 PTPRKQ15262 1439 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 TMEM94Q12767 1356 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 PIK3R4Q99570 1358 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 OTOFQ9HC10 1997 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PXDNLA1KZ92 1463 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 NUP153P49790 1475 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 A0A1B0GW15 77 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 ERICH2A1L162 156 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RAB19A4D1S5 217 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 GOLGA8IPA6NC78 632 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 ARGFXA6NJG6 315 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 FGF16O43320 207 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 FADS2O95864 444 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 GPX1P07203 203 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 CRYGDP07320 174 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RPA3P35244 121 aaPredicted RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RANBP1P43487 201 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 HADHBP55084 474 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 OR10A3P58181 314 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RAB2AP61019 212 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RHOAP61586 193 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 TNNC1P63316 161 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 BSPH1Q075Z2 132 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 TSPAN31Q12999 210 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PDGFRLQ15198 375 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 MMDQ15546 238 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 OR8G1Q15617 311 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 TRAM1Q15629 374 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PSG3Q16557 428 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 GOLGA7BQ2TAP0 167 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 C18orf21Q32NC0 220 aaPredicted RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 CLEC6AQ6EIG7 209 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 DGAT2L6Q6ZPD8 337 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 MRPL52Q86TS9 123 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 SPATA24Q86W54 205 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 SLC25A45Q8N413 288 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 C17orf78Q8N4C9 275 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 NAV1Q8NEY1 1877 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 OR4K17Q8NGC6 315 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PDCD6IPQ8WUM4 868 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PPWD1Q96BP3 646 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 LRRC45Q96CN5 670 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PGLYRP3Q96LB9 341 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 PRSS27Q9BQR3 290 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 MRPL32Q9BYC8 188 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 RAB1BQ9H0U4 201 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 TMBIM4Q9HC24 238 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 DIABLOQ9NR28 239 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 POFUT2Q9Y2G5 429 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 ATAD5Q96QE3 1844 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 ARAP3Q8WWN8 1544 aa0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
SMCHD1-206ENST00000581631 MAP3K19Q56UN5 1328 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MUC21A0A0G2JKD1 596 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MUC21A0A140T8X8 626 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 FAM183AA6NL82 134 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 RNASEK-C17orf49H0YIS7 233 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 TMEM250H0YL14 139 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 BOLA2-SMG1P6H3BVE0 249 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 UBDO15205 165 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 BRI3O95415 125 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 YEATS4O95619 227 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 SOD1P00441 154 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 CST4P01036 141 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 LTAP01374 205 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 GIMD1P0DJR0 217 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 CCL2P13500 99 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms