RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RCVRNP35243 200 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 SPAM1P38567 509 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 XRCC4Q13426 336 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 SYCP1Q15431 976 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 TMEM249Q2WGJ8 235 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 NIPAL1Q6NVV3 410 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 MUC15Q8N387 334 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 LMX1AQ8TE12 382 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 DTD1Q8TEA8 209 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 HIST1H2BAQ96A08 127 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 RAD51AP1Q96B01 352 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 CFAP53Q96M91 514 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 DMAC2Q9NW81 257 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 RPUSD1Q9UJJ7 312 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 LINC00588Q9Y4M8 146 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 USP42Q9H9J4 1324 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 HECW2Q9P2P5 1572 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 KIF13AQ9H1H9 1805 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 DNMT1P26358 1616 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 UACAQ9BZF9 1416 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 CUL7Q14999 1698 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 PPRC1Q5VV67 1664 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 HSBP1L1C9JCN9 74 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 J3QRE1 110 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 LECT2O14960 151 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 CDK14O94921 469 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 OR12D1P0DN82 309 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 ATF1P18846 271 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 ACTR1BP42025 376 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 INPP1P49441 399 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 CST6Q15828 149 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 PYCR3Q53H96 274 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 C10orf91Q5T1B1 145 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 NOXRED1Q6NXP6 359 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 C17orf78Q8N4C9 275 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 RNASEH2CQ8TDP1 164 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 OR8B2Q96RD0 313 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 BCL2L14Q9BZR8 327 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 MRPL16Q9NX20 251 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 EPRSP07814 1512 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 DHX57Q6P158 1386 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 KIAA0232Q92628 1395 aa2.1□□□□□ -2.07
SMCHD1-205ENST00000581383 ZCCHC11Q5TAX3 1644 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 WDR7Q9Y4E6 1490 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 RAPGEF2Q9Y4G8 1499 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 ERICH2A1L162 156 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 NPPAP01160 153 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 C1QTNF8P60827 252 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 TSPAN31Q12999 210 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 SKP2Q13309 424 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 HES3Q5TGS1 186 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 NIT1Q86X76 327 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 OR5D18Q8NGL1 313 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 OR10D4PQ8NGN7 298 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 OR11L1Q8NGX0 322 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 ZCCHC13Q8WW36 166 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 OR52A5Q9H2C5 316 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 MS4A12Q9NXJ0 267 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 COMMD9Q9P000 198 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 FBXL3Q9UKT7 428 aa2.09□□□□□ -2.07
SMCHD1-205ENST00000581383 PCNX2A6NKB5 2137 aa2.09□□□□□ -2.08
SMCHD1-205ENST00000581383 KIF21BO75037 1637 aa2.09□□□□□ -2.08
SMCHD1-205ENST00000581383 UHRF1BP1LA0JNW5 1464 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 UGGT2Q9NYU1 1516 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 KDM5BQ9UGL1 1544 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ABCA8O94911 1581 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 IGKV1-12A0A0C4DH73 117 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNF878C9JN71 531 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 KLRC4-KLRK1H3BQV0 150 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNF73O43830 326 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 SOX14O95416 240 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 LTAP01374 205 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 IGKV1D-12P01611 117 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 RD3LP0DJH9 198 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 CRABP1P29762 137 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 GABRA3P34903 492 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 PSMD7P51665 324 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 PAFAH1B3Q15102 231 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 OR9I1Q8NGQ6 314 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNRF2Q8NHG8 242 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 CCDC12Q8WUD4 166 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 TMEM56Q96MV1 263 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 HBEGFQ99075 208 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ACBD6Q9BR61 282 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 ZNF286AQ9HBT8 521 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 DOCK6Q96HP0 2047 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 PTPRKQ15262 1439 aa2.08□□□□□ -2.08
SMCHD1-205ENST00000581383 LTBP2Q14767 1821 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 CDK13Q14004 1512 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 LCTP09848 1927 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 GLI2P10070 1586 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 FRMPD1Q5SYB0 1578 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 MAP3K4Q9Y6R4 1608 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 IQCF5A8MTL0 148 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 B4DEV8 164 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 SMLR1H3BR10 107 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 K7EQS6 105 aa2.07□□□□□ -2.08
SMCHD1-205ENST00000581383 SLC25A20O43772 301 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms