RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 OR5M8Q8NGP6 311 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 TMEM106AQ96A25 262 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 S1PR3Q99500 378 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 SCOCQ9UIL1 159 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 ZNF580Q9UK33 172 aa8.3□□□□□ -1.08
RFFL-209ENST00000581265 SIRT4Q9Y6E7 314 aaPredicted RBP8.3□□□□□ -1.08
RFFL-209ENST00000581265 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 LCE6AA0A183 80 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 LOC100130705A0A1B0GUX0 176 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 ZNF736B4DX44 427 aaPredicted RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 TXNL1O43396 289 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 IGF1P05019 195 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 GTF2F2P13984 249 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 PSMB8P28062 276 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 BDKRB2P30411 391 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 SOX6P35712 828 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 LUMP51884 338 aaPredicted RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 ZNF134P52741 427 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 RAB25P57735 213 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 PPP3R1P63098 170 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 XAF1Q6GPH4 301 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 FAM53AQ6NSI3 398 aaPredicted RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 GAPTQ8N292 157 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 CCDC107Q8WV48 283 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 S100A13Q99584 98 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 SLC29A1Q99808 456 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 RASL11BQ9BPW5 248 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 CHCHD6Q9BRQ6 235 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 FGF20Q9NP95 211 aaPredicted RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 GAR1Q9NY12 217 aaKnown RBP8.29□□□□□ -1.08
RFFL-209ENST00000581265 SORL1Q92673 2214 aa8.29□□□□□ -1.08
RFFL-209ENST00000581265 IGHV3-43A0A0B4J1X8 118 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 OGG1O15527 345 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 GPX5O75715 221 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 IGHV3-43DP0DP04 118 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 SERPINA2P20848 420 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 DCKP27707 260 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 F2RL1P55085 397 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 FHL3Q13643 280 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 GPR176Q14439 515 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 TMEM30BQ3MIR4 351 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 SLC22A6Q4U2R8 563 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 CT45A1Q5HYN5 189 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 ATAD3CQ5T2N8 411 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 STX19Q8N4C7 294 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 CT45A3Q8NHU0 189 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 UBALD1Q8TB05 177 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 MYOZ3Q8TDC0 251 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 C4orf3Q8WVX3 66 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 APH1BQ8WW43 257 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 MRPS24Q96EL2 167 aaKnown RBP8.28□□□□□ -1.08
RFFL-209ENST00000581265 HSPB9Q9BQS6 159 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 C9orf16Q9BUW7 83 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 SPACA1Q9HBV2 294 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 RAB9BQ9NP90 201 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
RFFL-209ENST00000581265 RCC2Q9P258 522 aaKnown RBP8.28□□□□□ -1.08
RFFL-209ENST00000581265 A0A1W2PP11 408 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 SEC14L6B5MCN3 397 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 C12orf77C9JDV5 145 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 MCRIP1C9JLW8 97 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 AIPO00170 330 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 SLC31A2O15432 143 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 SPINT2O43291 252 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 CA11O75493 328 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 WBP4O75554 376 aaKnown RBP8.27□□□□□ -1.09
RFFL-209ENST00000581265 OR5H8P0DN80 308 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 IGFBP3P17936 291 aaPredicted RBP8.27□□□□□ -1.09
RFFL-209ENST00000581265 VDAC1P21796 283 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 ECI1P42126 302 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 ETV1P50549 477 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 INSL3P51460 131 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 RIPK1Q13546 671 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 KIAA0141Q14154 515 aaPredicted RBP8.27□□□□□ -1.09
RFFL-209ENST00000581265 SYT6Q5T7P8 510 aaPredicted RBP8.27□□□□□ -1.09
RFFL-209ENST00000581265 TMPRSS11AQ6ZMR5 421 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 C10orf67Q8IYJ2 551 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 OR11H1Q8NG94 326 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 ORAI1Q96D31 301 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 SMIM19Q96E16 107 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 KCTD7Q96MP8 289 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 PRR25Q96S07 402 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 ZNF184Q99676 751 aaPredicted RBP8.27□□□□□ -1.09
RFFL-209ENST00000581265 GNG12Q9UBI6 72 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 TRAPPC2LQ9UL33 140 aa8.27□□□□□ -1.09
RFFL-209ENST00000581265 TRBV5-5A0A0J9YX44 114 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 LANCL1O43813 399 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 HBZP02008 142 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 GLAP06280 429 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 LYL1P12980 280 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 CHATP28329 748 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms