RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 DYRK2Q92630 601 aa11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PECRQ9BY49 303 aa11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GFOD1Q9NXC2 390 aa11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
SNORD3B-1-201ENST00000577988 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SERPINE3A8MV23 424 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 J3QR06 171 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 HBZP02008 142 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CLEC2LP0C7M8 214 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RCC1P18754 421 aaPredicted RBP11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LOXL3P58215 753 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LY6G6FQ5SQ64 297 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 NDNFQ8TB73 568 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 MDFIQ99750 246 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SSX3Q99909 188 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 ATG5Q9H1Y0 275 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 MMP28Q9H239 520 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 TAF9BQ9HBM6 251 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
SNORD3B-1-201ENST00000577988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.617e-10■■■□□ 17.6
SNORD3B-1-201ENST00000577988 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 A0A0A6YYH2 397 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 A0A0B4J203 849 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 A6NJ64 397 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CRYBA1P05813 215 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RPS19P39019 145 aaKnown RBP11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 EFNB2P52799 333 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LSM3P62310 102 aaKnown RBP11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 HTD2P86397 168 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 HMGN3Q15651 99 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CCDC144NLQ6NUI1 221 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LHFPL4Q7Z7J7 247 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SPATA3Q8NHX4 192 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GALMQ96C23 342 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 C12orf4Q9NQ89 552 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SPATA2Q9UM82 520 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
SNORD3B-1-201ENST00000577988 TMEM89A2RUT3 159 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RGS11O94810 467 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GABARAPO95166 117 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CD3GP09693 182 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 HKR1P10072 659 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 BRS3P32247 399 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RPL5P46777 297 aaKnown RBP11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PLA2G7Q13093 441 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SSX2Q16385 188 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LGALS14Q8TCE9 139 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CHIAQ9BZP6 476 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 ABCB10Q9NRK6 738 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 RHBDL2Q9NX52 303 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GNG12Q9UBI6 72 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 JPT1Q9UK76 154 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
SNORD3B-1-201ENST00000577988 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 MFNGO00587 321 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 YPEL1O60688 119 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 GSTP1P09211 210 aaKnown RBP11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SERPINB10P48595 397 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 NCS1P62166 190 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 ACTG1P63261 375 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 PITPNAQ00169 270 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 FOXL1Q12952 345 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 CTF1Q16619 201 aa11.23□□□□□ -0.61
SNORD3B-1-201ENST00000577988 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 12.8
SNORD3B-1-201ENST00000577988 LTC4SQ16873 150 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms