RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KCNK15Q9H427 330 aa18.92■□□□□ 0.62
SNF8-217ENST00000576353 KCNIP1Q9NZI2 227 aa18.92■□□□□ 0.62
SNF8-217ENST00000576353 CHST1O43916 411 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 IGHV3-7P01780 117 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 JUNBP17275 347 aaPredicted RBP18.91■□□□□ 0.62
SNF8-217ENST00000576353 BLVRBP30043 206 aaPredicted RBP18.91■□□□□ 0.62
SNF8-217ENST00000576353 MNDAP41218 407 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 KIR2DS4P43632 304 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 C22orf42Q6IC83 251 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 CCBE1Q6UXH8 406 aaPredicted RBP18.91■□□□□ 0.62
SNF8-217ENST00000576353 OR51D1Q8NGF3 324 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 RPEQ96AT9 228 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 FAM3DQ96BQ1 224 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 FAAP24Q9BTP7 215 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 FBLN5Q9UBX5 448 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 STEAP1Q9UHE8 339 aa18.91■□□□□ 0.62
SNF8-217ENST00000576353 C12orf77C9JDV5 145 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 RCC1P18754 421 aaPredicted RBP18.9■□□□□ 0.62
SNF8-217ENST00000576353 GNG10P50151 68 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 PROK1P58294 105 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 MADCAM1Q13477 382 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 C2orf76Q3KRA6 126 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 C6orf201Q7Z4U5 140 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 ZNF554Q86TJ5 538 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 TMEM219Q86XT9 240 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 OR10X1Q8NGY0 326 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 SULT4A1Q9BR01 284 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 NICN1Q9BSH3 213 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 LPAR5Q9H1C0 372 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 PLEKHJ1Q9NW61 149 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 GFOD1Q9NXC2 390 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 STUB1Q9UNE7 303 aa18.9■□□□□ 0.62
SNF8-217ENST00000576353 RAB3BP20337 219 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 FGF9P31371 208 aaPredicted RBP18.89■□□□□ 0.61
SNF8-217ENST00000576353 CLDN12P56749 244 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 LOXL3P58215 753 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 Q3ZCU0 254 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 C11orf88Q6PI97 169 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 FAM89BQ8N5H3 189 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 C8orf31Q8N9H6 132 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 UBALD1Q8TB05 177 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 TOMM40LQ969M1 308 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 TAF9BQ9HBM6 251 aa18.89■□□□□ 0.61
SNF8-217ENST00000576353 MBNL3Q9NUK0 354 aaKnown RBP18.89■□□□□ 0.61
SNF8-217ENST00000576353 IFITM5A6NNB3 132 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 HBZP02008 142 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 HES5Q5TA89 166 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 OR2T6Q8NHC8 308 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 MRPL30Q8TCC3 161 aaKnown RBP18.88■□□□□ 0.61
SNF8-217ENST00000576353 GNG12Q9UBI6 72 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 SSR3Q9UNL2 185 aa18.88■□□□□ 0.61
SNF8-217ENST00000576353 A0A0A6YYD4 124 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 SHISA3A0PJX4 238 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 RAB7AP51149 207 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 C16orf82Q7Z2V1 217 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 PRR18Q8N4B5 295 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 LINC00311Q8N616 119 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 RIMS4Q9H426 269 aaPredicted RBP18.87■□□□□ 0.61
SNF8-217ENST00000576353 TXNL4BQ9NX01 149 aaKnown RBP18.87■□□□□ 0.61
SNF8-217ENST00000576353 RAB22AQ9UL26 194 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 HSF4Q9ULV5 492 aa18.87■□□□□ 0.61
SNF8-217ENST00000576353 IGHV3-43A0A0B4J1X8 118 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 LDLRAD4O15165 306 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 SOCS1O15524 211 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 IGHV3-43DP0DP04 118 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 OR10A3P58181 314 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 NEDD8Q15843 81 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 OR56B1Q8NGI3 324 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 OR1L1Q8NH94 360 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 CAPSLQ8WWF8 208 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 AKR1E2Q96JD6 320 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 CITED1Q99966 193 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 OCSTAMPQ9BR26 566 aa18.86■□□□□ 0.61
SNF8-217ENST00000576353 A0A1W2PPE3 182 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 FAM106CPP0CH98 169 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 CD24P25063 80 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 VEGFCP49767 419 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 TPRA1Q86W33 373 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 OR8H3Q8N146 312 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 CYYR1Q96J86 154 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 PRSS22Q9GZN4 317 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 LIN7BQ9HAP6 207 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 CHMP1AQ9HD42 196 aaPredicted RBP18.85■□□□□ 0.61
SNF8-217ENST00000576353 OR2S2Q9NQN1 319 aa18.85■□□□□ 0.61
SNF8-217ENST00000576353 TMEM272A0A1B0GTI8 110 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 TNFAIP8O95379 198 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 IL3RAP26951 378 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 EFNB2P52799 333 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 SRSF4Q08170 494 aaKnown RBP18.84■□□□□ 0.61
SNF8-217ENST00000576353 STEAP3Q658P3 488 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 Q6ZTK2 550 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 THNSL2Q86YJ6 484 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 Q8N2B8 174 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 GALMQ96C23 342 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 ABRACLQ9P1F3 81 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 SIGLEC9Q9Y336 463 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 FBN3Q75N90 2809 aa18.84■□□□□ 0.61
SNF8-217ENST00000576353 FOXI3A8MTJ6 420 aaPredicted RBP18.83■□□□□ 0.6
SNF8-217ENST00000576353 TIMM23O14925 209 aa18.83■□□□□ 0.6
SNF8-217ENST00000576353 NAPSAO96009 420 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms