RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ZNF441Q8N8Z8 693 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 SNIP1Q8TAD8 396 aaKnown RBP12.48□□□□□ -0.41
SCARF1-209ENST00000576012 RDH5Q92781 318 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 SPTSSAQ969W0 71 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-209ENST00000576012 SIGLEC12Q96PQ1 595 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 DECR2Q9NUI1 292 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 CACNG5Q9UF02 275 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 PPP1R3CQ9UQK1 317 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 PAM16Q9Y3D7 125 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 KNTC1P50748 2209 aa12.48□□□□□ -0.41
SCARF1-209ENST00000576012 UBE2G2P60604 165 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 TCF23Q7RTU1 214 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 HLA-CQ95604 372 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 TMEM18Q96B42 140 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 V9GYS6 101 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 PDCD6O75340 191 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 FAM78BQ5VT40 261 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 ANGPTL4Q9BY76 406 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 TAAR3PQ9P1P4 343 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 ZDBF2Q9HCK1 2354 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 CACNA1EQ15878 2313 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 DHHO43323 396 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 DTYMKP23919 212 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 CFHR1Q03591 330 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-209ENST00000576012 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 KIAA0895LQ68EN5 471 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 GPR146Q96CH1 333 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 TBX15Q96SF7 602 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 AKIRIN1Q9H9L7 192 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-209ENST00000576012 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
SCARF1-209ENST00000576012 CST2P09228 141 aa12.46□□□□□ -0.41
SCARF1-209ENST00000576012 ZNF92Q03936 586 aa12.46□□□□□ -0.41
SCARF1-209ENST00000576012 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.41
SCARF1-209ENST00000576012 PATZ1Q9HBE1 687 aaKnown RBP12.46□□□□□ -0.41
SCARF1-209ENST00000576012 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
SCARF1-209ENST00000576012 NCOR1O75376 2440 aa12.46□□□□□ -0.41
SCARF1-209ENST00000576012 TRBV24-1A0A075B6N3 115 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 A0A1B0GX78 115 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 ZNF320A2RRD8 509 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 SLC22A20A6NK97 555 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 B4DEV8 164 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 TIAF1O95411 115 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 VDAC1P21796 283 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 RAB30Q15771 203 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 ZNF845Q96IR2 970 aaPredicted RBP12.46□□□□□ -0.42
SCARF1-209ENST00000576012 MRGPRX4Q96LA9 322 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 PSENENQ9NZ42 101 aa12.46□□□□□ -0.42
SCARF1-209ENST00000576012 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 RND2P52198 227 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 KCNS2Q9ULS6 477 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 FER1L5A0AVI2 2057 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 H1FOOQ8IZA3 346 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 C11orf1Q9H5F2 150 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 CISD1Q9NZ45 108 aaKnown RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 CLEC1BQ9P126 229 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 ERRFI1Q9UJM3 462 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 TNFSF11O14788 317 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 TGOLN2O43493 480 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 ZNF32P17041 273 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 UCP3P55916 312 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 CD81P60033 236 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 ID3Q02535 119 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 EIF3IQ13347 325 aaKnown RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 ACTR3CQ9C0K3 210 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 PARLQ9H300 379 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 POLR3KQ9Y2Y1 108 aaPredicted RBP12.45□□□□□ -0.42
SCARF1-209ENST00000576012 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
SCARF1-209ENST00000576012 A0A0U1RQV5 110 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 GDF9O60383 454 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 IGKV1D-33P01593 117 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 IGKV1-33P01594 117 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 IRF2P14316 349 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 BCL3P20749 454 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 CNN3Q15417 329 aaKnown RBP12.44□□□□□ -0.42
SCARF1-209ENST00000576012 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms