RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 MRPL30Q8TCC3 161 aaKnown RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 C17orf50Q8WW18 174 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 GCDHQ92947 438 aaPredicted RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 PHF21AQ96BD5 680 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 CMSS1Q9BQ75 279 aaKnown RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 AK3Q9UIJ7 227 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
LITAF-217ENST00000575426 HILPDAQ9Y5L2 63 aa12.34□□□□□ -0.43
LITAF-217ENST00000575426 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 C12orf77C9JDV5 145 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 C15orf65H3BRN8 121 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 H3BUX3 64 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 IGHV3-7P01780 117 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 GNG10P50151 68 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 ARHGDIBP52566 201 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 EFNB2P52799 333 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 TMEM50BP56557 158 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 SCAND1P57086 179 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 PLA2G7Q13093 441 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 ARL6IP1Q15041 203 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 AANATQ16613 207 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
LITAF-217ENST00000575426 ABRACLQ9P1F3 81 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 MGAT4AQ9UM21 535 aa12.33□□□□□ -0.44
LITAF-217ENST00000575426 FBN1P35555 2871 aaKnown RBP12.33□□□□□ -0.44
LITAF-217ENST00000575426 FOXI3A8MTJ6 420 aaPredicted RBP12.32□□□□□ -0.44
LITAF-217ENST00000575426 J3QR06 171 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 F2RL2O00254 374 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 SCGNO76038 276 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 IGLV1-47P01700 117 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 HBZP02008 142 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 CD3GP09693 182 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 TGFBR1P36897 503 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 RPS19P39019 145 aaKnown RBP12.32□□□□□ -0.44
LITAF-217ENST00000575426 SERPINB10P48595 397 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 HLA-DRB5Q30154 266 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 PLA1AQ53H76 456 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 MOB1BQ7L9L4 216 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 OR4P4Q8NGL7 312 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 LGALS14Q8TCE9 139 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 LEAP2Q969E1 77 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 AJUBAQ96IF1 538 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 CHIAQ9BZP6 476 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 MMP28Q9H239 520 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 GNG12Q9UBI6 72 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 PSG11Q9UQ72 335 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 ETV7Q9Y603 341 aa12.32□□□□□ -0.44
LITAF-217ENST00000575426 A0A075B6Q4 140 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 IGHV3-43A0A0B4J1X8 118 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 POM121CA8CG34 1229 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 NAPSAO96009 420 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 IGHV3-43DP0DP04 118 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 PAX6P26367 422 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 VBP1P61758 197 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 ARFRP1Q13795 201 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 ANKRD13BQ86YJ7 626 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 GALMQ96C23 342 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
LITAF-217ENST00000575426 COL6A5A8TX70 2615 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 RAB27BO00194 218 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 RGS11O94810 467 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 TFAP2AP05549 437 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 HIST1H1DP16402 221 aaKnown RBP12.3□□□□□ -0.44
LITAF-217ENST00000575426 GNB3P16520 340 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 BRS3P32247 399 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 TALDO1P37837 337 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 ALDH3B2P48448 385 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
LITAF-217ENST00000575426 NCS1P62166 190 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 LY6EQ16553 131 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 Q3ZCU0 254 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 DYNAPQ8N1N2 210 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 RPEQ96AT9 228 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 CYYR1Q96J86 154 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
LITAF-217ENST00000575426 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 SPATA2Q9UM82 520 aa12.3□□□□□ -0.44
LITAF-217ENST00000575426 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
LITAF-217ENST00000575426 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
LITAF-217ENST00000575426 SERPINE3A8MV23 424 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms