RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MRPS15P82914 257 aaKnown RBP8.97□□□□□ -0.97
CHD3-216ENST00000573936 IDNKQ5T6J7 187 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 LDLRAD3Q86YD5 345 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
CHD3-216ENST00000573936 ZDHHC22Q8N966 263 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 BEND2Q8NDZ0 799 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 OR52M1Q8NGK5 317 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 OR10R2Q8NGX6 335 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 OR4K15Q8NH41 348 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 SSMEM1Q8WWF3 244 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 CREB3L1Q96BA8 519 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 MALSU1Q96EH3 234 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 KIRREL1Q96J84 757 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 DCUN1D5Q9BTE7 237 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 PECRQ9BY49 303 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 MEGF9Q9H1U4 602 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 CHMP1AQ9HD42 196 aaPredicted RBP8.97□□□□□ -0.97
CHD3-216ENST00000573936 ABRACLQ9P1F3 81 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 MGAT4AQ9UM21 535 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 ETV7Q9Y603 341 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 SOX21Q9Y651 276 aaPredicted RBP8.97□□□□□ -0.97
CHD3-216ENST00000573936 POMT1Q9Y6A1 747 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 TRBV6-6A0A0A6YYG2 114 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 A0A0B4J203 849 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 MDFIC2A0A1B0GVS7 189 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 BTBD17A6NE02 478 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 DNAJC9-AS1A6NH13 148 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 FOXI3A8MTJ6 420 aaPredicted RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 C15orf65H3BRN8 121 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 MELTFP08582 738 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 SSTR5P35346 364 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 EFNB2P52799 333 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 UBA52P62987 128 aaKnown RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 AANATQ16613 207 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 CNPY1Q3B7I2 92 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 Q3ZCU0 254 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 MOB1BQ7L9L4 216 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 OR9G1Q8NH87 305 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 RFESDQ8TAC1 157 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 MRPL30Q8TCC3 161 aaKnown RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 FAM216AQ8WUB2 273 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 DYRK2Q92630 601 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 GCDHQ92947 438 aaPredicted RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 PHF21AQ96BD5 680 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 RAB3CQ96E17 227 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 ARHGAP5-AS1Q96IT6 56 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 ATG5Q9H1Y0 275 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 ESM1Q9NQ30 184 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 CCDC59Q9P031 241 aaKnown RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 SPATA2Q9UM82 520 aa8.96□□□□□ -0.98
CHD3-216ENST00000573936 AMMECR1Q9Y4X0 333 aaPredicted RBP8.96□□□□□ -0.98
CHD3-216ENST00000573936 SERPINE3A8MV23 424 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 F2RL2O00254 374 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 SDCBPO00560 298 aaPredicted RBP8.95□□□□□ -0.98
CHD3-216ENST00000573936 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
CHD3-216ENST00000573936 NAPSAO96009 420 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 CD3GP09693 182 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 HTR1DP28221 377 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 GDNFP39905 211 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 CEACAM3P40198 252 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 IER3P46695 156 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 RORCP51449 518 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 PLA2G7Q13093 441 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 SLC9A3R2Q15599 337 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 ZNF880Q6PDB4 577 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 C16orf87Q6PH81 154 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
CHD3-216ENST00000573936 CMSS1Q9BQ75 279 aaKnown RBP8.95□□□□□ -0.98
CHD3-216ENST00000573936 SLIRPQ9GZT3 109 aaKnown RBP8.95□□□□□ -0.98
CHD3-216ENST00000573936 TAF9BQ9HBM6 251 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 ZNF286AQ9HBT8 521 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 DPM3Q9P2X0 92 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 AK3Q9UIJ7 227 aa8.95□□□□□ -0.98
CHD3-216ENST00000573936 A0A0A6YYH2 397 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 A6NJ64 397 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 LEUTXA8MZ59 168 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 C12orf77C9JDV5 145 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 J3QR06 171 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 RAB27BO00194 218 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 IGLV1-47P01700 117 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 HBZP02008 142 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 RNASE1P07998 156 aaKnown RBP8.94□□□□□ -0.98
CHD3-216ENST00000573936 HIST1H1DP16402 221 aaKnown RBP8.94□□□□□ -0.98
CHD3-216ENST00000573936 RCC1P18754 421 aaPredicted RBP8.94□□□□□ -0.98
CHD3-216ENST00000573936 SOX6P35712 828 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 ARHGDIBP52566 201 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 HTD2P86397 168 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 LTC4SQ16873 150 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 HLA-DRB5Q30154 266 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 PLAC9Q5JTB6 97 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 BAIAP2L2Q6UXY1 529 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 LHFPL4Q7Z7J7 247 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 PRR18Q8N4B5 295 aa8.94□□□□□ -0.98
CHD3-216ENST00000573936 C8orf31Q8N9H6 132 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms