RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 WDR13Q9H1Z4 485 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 OR51J1Q9H342 316 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 RIBC2Q9H4K1 309 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 HEXA-AS1Q9H8Q6 139 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 FN3KRPQ9HA64 309 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 CLN6Q9NWW5 311 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 POFUT2Q9Y2G5 429 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 NPTNQ9Y639 398 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 CDH10Q9Y6N8 788 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 TANC2Q9HCD6 1990 aa4.27□□□□□ -1.73
SF3B3-214ENST00000572365 HERC2O95714 4834 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 HUWE1Q7Z6Z7 4374 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 MUC4Q99102 2169 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TRAV40A0A0B4J280 105 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 A0A0D9SG52 128 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF816-ZNF321PA0A0X1KG74 233 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 LCE6AA0A183 80 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 C5orf63A6NC05 138 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 RFPL4AA6NLU0 287 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 SRRM5B3KS81 715 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 RFPL4AL1F8VTS6 287 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TCAPO15273 167 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TGOLN2O43493 480 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 EIF3GO75821 320 aaKnown RBP eCLIP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 RPP14O95059 124 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 NDUFA7O95182 113 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 IGLV1-44P01699 117 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 CHRNGP07510 517 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 SLC6A1P30531 599 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 GGT2P36268 569 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 CEACAM6P40199 344 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 CDKN2CP42773 168 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 MAP2K4P45985 399 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 SRP9P49458 86 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 NCBP2P52298 156 aaKnown RBP eCLIP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 POLR2JP52435 117 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 UBE2NP61088 152 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 PKIAP61925 76 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 MLLT11Q13015 90 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 LRRC37A5PQ49AS3 106 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF57Q68EA5 555 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 OR2T5Q6IEZ7 315 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 CD164L2Q6UWJ8 174 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 AHSA2Q719I0 299 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 DCXRQ7Z4W1 244 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 GOLGA7Q7Z5G4 137 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 HMGN2P46Q86SG4 172 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 C1orf174Q8IYL3 243 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 OR6V1Q8N148 313 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 FAM71CQ8NEG0 241 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 BEST4Q8NFU0 473 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 OR4F15Q8NGB8 312 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 OR1K1Q8NGR3 316 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 OR2T29Q8NH02 315 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 RAB39BQ96DA2 213 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 BPIFA2Q96DR5 249 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 RAB3CQ96E17 227 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 PYURFQ96I23 114 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 NOL4LQ96MY1 436 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 S100A13Q99584 98 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TMEM43Q9BTV4 400 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TMED9Q9BVK6 235 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 CLEC7AQ9BXN2 247 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 EBPLQ9BY08 206 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 GABARAPL3Q9BY60 117 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 DERL2Q9GZP9 239 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 FNDC4Q9H6D8 234 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TUBA4BQ9H853 241 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 REEP1Q9H902 201 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 NOX3Q9HBY0 568 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 SMCO4Q9NRQ5 59 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 DCAF13Q9NV06 445 aaKnown RBP4.26□□□□□ -1.73
SF3B3-214ENST00000572365 NUDT15Q9NV35 164 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TAS2R3Q9NYW6 316 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 TAAR3PQ9P1P4 343 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 PPP1R3CQ9UQK1 317 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 U3KQK5 164 aa4.26□□□□□ -1.73
SF3B3-214ENST00000572365 A0A1W2PQL4 384 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GJE1A6NN92 205 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SNRPGP15A8MWD9 76 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 FAM220BPB1ANY3 271 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 TRDCB7Z8K6 153 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 NPIPB9F8W1W9 429 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 H0YIV9 168 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 C3orf84H3BNL1 204 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 FOXE1O00358 373 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-214ENST00000572365 OR7A17O14581 309 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 AZIN1O14977 448 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SURF4O15260 269 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SSNA1O43805 119 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 UPK3AO75631 287 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GPX5O75715 221 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 PDYNP01213 254 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 IFNA17P01571 189 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 MELTFP08582 738 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 GKN3PP0CG01 181 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SULT1A3P0DMM9 295 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 SULT1A4P0DMN0 295 aa4.25□□□□□ -1.73
SF3B3-214ENST00000572365 BCKDHAP12694 445 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms