RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 C5orf24Q7Z6I8 188 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 C1QL4Q86Z23 238 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 PHYHIPQ92561 330 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 CITED2Q99967 270 aaPredicted RBP14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 OCSTAMPQ9BR26 566 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 WNT10AQ9GZT5 417 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 GNG12Q9UBI6 72 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 IGHV3-72A0A0B4J1Y9 119 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A10PA6NDY2 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A18PA6NE21 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A16PA6NEW6 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A20PA6NIJ5 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A7PA6NKC0 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A12PA8MX19 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A5PA8MXJ8 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A23PA8MXZ1 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 CCRL2O00421 344 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 HSD17B6O14756 317 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 SLC31A2O15432 143 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 SPINT2O43291 252 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 ATP6V1G2O95670 118 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 IGKV1D-33P01593 117 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 IGKV1-33P01594 117 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 HBZP02008 142 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A15PP0C7V4 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A13PP0C7W8 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A14PP0C7W9 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A24PP0C7X0 464 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 TMEM11P17152 192 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 HTR2CP28335 458 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 RAB7AP51149 207 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 LOXL3P58215 753 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 MLLT11Q13015 90 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 TPBGQ13641 420 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 P2RY14Q15391 338 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 C1orf100Q5SVJ3 147 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 C6orf183Q5T699 404 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 MOB3BQ86TA1 216 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 NEDD4LQ96PU5 975 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 MGLLQ99685 303 aa14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 AK6Q9Y3D8 172 aaKnown RBP14.18□□□□□ -0.14
CTDNEP1-207ENST00000572043 TRRAPQ9Y4A5 3859 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 A0A1W2PRX2 142 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 AMY1AP04745 511 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 AMY2AP04746 511 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 UBBP0CG47 229 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR52M1Q8NGK5 317 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 NICN1Q9BSH3 213 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 TMEM59Q9BXS4 323 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 PLGRKTQ9HBL7 147 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 TAF9BQ9HBM6 251 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 MOB4Q9Y3A3 225 aa14.17□□□□□ -0.14
CTDNEP1-207ENST00000572043 NBEAL1Q6ZS30 2694 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 SLC22A1O15245 554 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 GAPDHP04406 335 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 CPEP16870 476 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 CALRP27797 417 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 RPS27AP62979 156 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 FABP5Q01469 135 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 UNC119Q13432 240 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 C6orf201Q7Z4U5 140 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 CENPVQ7Z7K6 275 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR5AU1Q8NGC0 362 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR6M1Q8NGM8 313 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 MRPL30Q8TCC3 161 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 WIPF2Q8TF74 440 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 RBMXL1Q96E39 390 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 GFI1Q99684 422 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 SULT4A1Q9BR01 284 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 ISYNA1Q9NPH2 558 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 KCNIP1Q9NZI2 227 aa14.16□□□□□ -0.14
CTDNEP1-207ENST00000572043 IGHV1-3A0A0C4DH29 117 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 IL3RAP26951 378 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 CHATP28329 748 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 GNMTQ14749 295 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 C10orf99Q6UWK7 81 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 THNSL2Q86YJ6 484 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 GAPTQ8N292 157 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 LINC00311Q8N616 119 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR52L2PQ8NGH6 319 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 KCNG3Q8TAE7 436 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 RAB9BQ9NP90 201 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 RAB26Q9ULW5 256 aa14.15□□□□□ -0.14
CTDNEP1-207ENST00000572043 M0QZK8 103 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 CA11O75493 328 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 ARL6IP5O75915 188 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 GLAP06280 429 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 PSMA1P25786 263 aaKnown RBP14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 ZNF134P52741 427 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 CLDN12P56749 244 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 QRFPP83859 136 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 ZNF816Q0VGE8 651 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 TRAM1Q15629 374 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 CT45A1Q5HYN5 189 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 TRAT1Q6PIZ9 186 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
CTDNEP1-207ENST00000572043 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms