RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GDPD1Q8N9F7 314 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 OR6K6Q8NGW6 343 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 LRRC29Q8WV35 223 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 THRSPQ92748 146 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 APOBEC3DQ96AK3 386 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 AKR1E2Q96JD6 320 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 TSSK2Q96PF2 358 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 OR8B4Q96RC9 309 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 SRRQ9GZT4 340 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 PPIL3Q9H2H8 161 aaKnown RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 SP140LQ9H930 580 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 ELL3Q9HB65 397 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 MRPL22Q9NWU5 206 aaKnown RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 STEAP1Q9UHE8 339 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 KLHDC2Q9Y2U9 406 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 TRBV2A0A0J9YWF9 115 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 TVP23AA6NH52 213 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ZNF593O00488 134 aaPredicted RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 RTL8CO15255 209 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ZNF254O75437 659 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 SRSF10O75494 262 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 KHDRBS3O75525 346 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 PTTG1O95997 202 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ARG1P05089 322 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 KRT8P05787 483 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 PGA5P0DJD9 388 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 TMEM225BP0DP42 221 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 CD37P11049 281 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 MSR1P21757 451 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 MYL9P24844 172 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 CD24P25063 80 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 DCTDP32321 178 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 POU3F4P49335 361 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 NANOS3P60323 173 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 MXD1Q05195 221 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 SCN1BQ07699 218 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 SCRN3Q0VDG4 424 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ALKBH1Q13686 389 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 INSL4Q14641 139 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 KCNMB1Q16558 191 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 CEP78Q5JTW2 689 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 TRAT1Q6PIZ9 186 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 CEMP1Q6PRD7 247 aaPredicted RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 C16orf82Q7Z2V1 217 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 DPY19L4Q7Z388 723 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 LAX1Q8IWV1 398 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ZNF679Q8IYX0 411 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 OR2G2Q8NGZ5 317 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 RGP1Q92546 391 aaPredicted RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 CEP19Q96LK0 163 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 NOL4LQ96MY1 436 aaPredicted RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 ADAT1Q9BUB4 502 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 CTDSP1Q9GZU7 261 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ABCB9Q9NP78 766 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 ABRACLQ9P1F3 81 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 RABL2AQ9UBK7 228 aaPredicted RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 ZNF391Q9UJN7 358 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 LAMP5Q9UJQ1 280 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 GNG8Q9UK08 70 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 RABL2BQ9UNT1 228 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 TBL2Q9Y4P3 447 aaKnown RBP5.36□□□□□ -1.55
CHD3-213ENST00000571249 HILPDAQ9Y5L2 63 aa5.36□□□□□ -1.55
CHD3-213ENST00000571249 TRBV5-7A0A0A0MS05 114 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 TRAV34A0A0B4J273 112 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 NUPR2A6NF83 97 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 TMEM212A6NML5 194 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 H7C1C5 153 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 MAGEB4O15481 346 aaPredicted RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 RGS5O15539 181 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 SLC16A7O60669 478 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 SAP30O75446 220 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 TPPPO94811 219 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 OCM2P0CE71 109 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 OCMP0CE72 109 aaPredicted RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 PSKH1P11801 424 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 NR2C1P13056 603 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 RAB3BP20337 219 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 MFAP4P55083 255 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 DEFA1P59665 94 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 DEFA3P59666 94 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 GMFBP60983 142 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 LCN6P62502 163 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 EWSR1Q01844 656 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHD3-213ENST00000571249 ASAH1Q13510 395 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 GK2Q14410 553 aaPredicted RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 TRIM16LQ309B1 348 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 Q499Y3 187 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 STUMQ69YW2 141 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 SLC18B1Q6NT16 456 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 SFXN4Q6P4A7 337 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 ZNF782Q6ZMW2 699 aaPredicted RBP5.35□□□□□ -1.55
CHD3-213ENST00000571249 FOXL2NBQ6ZUU3 175 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 FAM220AQ7Z4H9 259 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 YIPF7Q8N8F6 280 aa5.35□□□□□ -1.55
CHD3-213ENST00000571249 OR6N2Q8NGY6 317 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms