RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CCBE1Q6UXH8 406 aaPredicted RBP11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 OR51D1Q8NGF3 324 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 NICN1Q9BSH3 213 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 NPFFR1Q9GZQ6 430 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 LPAR5Q9H1C0 372 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 RANBP3Q9H6Z4 567 aaPredicted RBP11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 FBLN5Q9UBX5 448 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 STEAP1Q9UHE8 339 aa11.12□□□□□ -0.63
HERPUD1-218ENST00000569569 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 SDCBPO00560 298 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 CHST1O43916 411 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 RCC1P18754 421 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 RAB3BP20337 219 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 FGF9P31371 208 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 MNDAP41218 407 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 CLDN12P56749 244 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 LOXL3P58215 753 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 PROK1P58294 105 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 TMEM30BQ3MIR4 351 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 C22orf42Q6IC83 251 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 CCDC144NLQ6NUI1 221 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 C6orf201Q7Z4U5 140 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 OR4C13Q8NGP0 309 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 WFDC12Q8WWY7 111 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 RPEQ96AT9 228 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 SULT4A1Q9BR01 284 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 PLEKHJ1Q9NW61 149 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 STUB1Q9UNE7 303 aa11.11□□□□□ -0.63
HERPUD1-218ENST00000569569 A0A0A6YYD4 124 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 GNG10P50151 68 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 MADCAM1Q13477 382 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 Q3ZCU0 254 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 HES5Q5TA89 166 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 C8orf31Q8N9H6 132 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 TXNL4BQ9NX01 149 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 RAB22AQ9UL26 194 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
HERPUD1-218ENST00000569569 IGHV3-43A0A0B4J1X8 118 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 IFITM5A6NNB3 132 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 LDLRAD4O15165 306 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 SOCS1O15524 211 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 HBZP02008 142 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 IGHV3-43DP0DP04 118 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 OR10A3P58181 314 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 C16orf82Q7Z2V1 217 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 PRR18Q8N4B5 295 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 OR1L1Q8NH94 360 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 CYYR1Q96J86 154 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 CITED1Q99966 193 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 RIMS4Q9H426 269 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 TAF9BQ9HBM6 251 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 HSF4Q9ULV5 492 aa11.09□□□□□ -0.63
HERPUD1-218ENST00000569569 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 TMEM272A0A1B0GTI8 110 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 CD24P25063 80 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 VEGFCP49767 419 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 RAB7AP51149 207 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 TMEM50BP56557 158 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 SRSF4Q08170 494 aaKnown RBP11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 NEDD8Q15843 81 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 Q6ZTK2 550 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 OR8H3Q8N146 312 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 OR56B1Q8NGI3 324 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 AKR1E2Q96JD6 320 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 PRSS22Q9GZN4 317 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 GNG12Q9UBI6 72 aa11.08□□□□□ -0.64
HERPUD1-218ENST00000569569 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 TNFAIP8O95379 198 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 NAPSAO96009 420 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 GAPDHP04406 335 aaKnown RBP11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 IL3RAP26951 378 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 EFNB2P52799 333 aa11.07□□□□□ -0.64
HERPUD1-218ENST00000569569 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms