RNA–Protein interactions for RNA: ENST00000569222.5

KIFC3-233, Transcript of kinesin family member C3, human

TSL 3

Gene KIFC3, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-233	ENST00000569222	GCDH	Q92947	438 aa	Predicted RBP	10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	KCTD7	Q96MP8	289 aa		10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	URM1	Q9BTM9	101 aa	Known RBP	10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	MMP28	Q9H239	520 aa		10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	SSR3	Q9UNL2	185 aa		10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	PSG11	Q9UQ72	335 aa		10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	KCNK7	Q9Y2U2	307 aa		10.83	□□□□□ -0.68
KIFC3-233	ENST00000569222	TRBV6-6	A0A0A6YYG2	114 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	BUB1B-PAK6	H3BSN5	160 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222		J3QR06	171 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	RAB27B	O00194	218 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	SLC2A2	P11168	524 aa	Predicted RBP	10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	RAB6A	P20340	208 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	NFYB	P25208	207 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	HTR1D	P28221	377 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	BLVRB	P30043	206 aa	Predicted RBP	10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	HMGN3	Q15651	99 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	TMEM30B	Q3MIR4	351 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	MOGAT2	Q3SYC2	334 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222		Q3ZCU0	254 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	FBLN7	Q53RD9	439 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	SFXN4	Q6P4A7	337 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	TRAT1	Q6PIZ9	186 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	GDPGP1	Q6ZNW5	385 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	OR1L1	Q8NH94	360 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	LEAP2	Q969E1	77 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	ARL11	Q969Q4	196 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	PTX4	Q96A99	478 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	NEDD4L	Q96PU5	975 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	FAAP24	Q9BTP7	215 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	VCX3A	Q9NNX9	186 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	GFOD1	Q9NXC2	390 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	DPM3	Q9P2X0	92 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	TCF19	Q9Y242	345 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	MMP24	Q9Y5R2	645 aa		10.82	□□□□□ -0.68
KIFC3-233	ENST00000569222	MGAM2	Q2M2H8	2515 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	LOC100506127	A0A0U1RQW1	187 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222		A6NDX4	124 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	BTBD17	A6NE02	478 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	MFNG	O00587	321 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	HBZ	P02008	142 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	CLEC2L	P0C7M8	214 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	MDK	P21741	143 aa	Predicted RBP	10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	RANBP1	P43487	201 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	RAG2	P55895	527 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	FOXL1	Q12952	345 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	TPTE2P1	Q5T6R2	138 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	LIAT1	Q6ZQX7	453 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	LINC00311	Q8N616	119 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	OR13F1	Q8NGS4	319 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	NDNF	Q8TB73	568 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	ARHGAP5-AS1	Q96IT6	56 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	TAF9B	Q9HBM6	251 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	AK3	Q9UIJ7	227 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	RAB22A	Q9UL26	194 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	TRAPPC2L	Q9UL33	140 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	NBEAL1	Q6ZS30	2694 aa		10.81	□□□□□ -0.68
KIFC3-233	ENST00000569222	CMYA5	Q8N3K9	4069 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222		A0A1W2PPI3	338 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	LEUTX	A8MZ59	168 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	OOSP1	A8MZH6	123 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	SDCBP	O00560	298 aa	Predicted RBP	10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	IGHV3-7	P01780	117 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	TGFBR1	P36897	503 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	VEGFC	P49767	419 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	ZNF137P	P52743	207 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	GNMT	Q14749	295 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	FAM189A2	Q15884	450 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	LTC4S	Q16873	150 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	TIMM50	Q3ZCQ8	353 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	PLA1A	Q53H76	456 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	OLFML2A	Q68BL7	652 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222		Q6ZSV7	163 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	MOB1B	Q7L9L4	216 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	C5orf24	Q7Z6I8	188 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	OR56B1	Q8NGI3	324 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	LGALS14	Q8TCE9	139 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	CREB3L1	Q96BA8	519 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	PECR	Q9BY49	303 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	C12orf4	Q9NQ89	552 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	HILPDA	Q9Y5L2	63 aa		10.8	□□□□□ -0.68
KIFC3-233	ENST00000569222	IGHV3-43	A0A0B4J1X8	118 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	POM121C	A8CG34	1229 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	SLC31A2	O15432	143 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	SPINT2	O43291	252 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	TSPAN9	O75954	239 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	IGHV3-43D	P0DP04	118 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	GNG10	P50151	68 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	RAB13	P51153	203 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	SCAND1	P57086	179 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	HTD2	P86397	168 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	DIAPH2-AS1	Q14236	149 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	HABP2	Q14520	560 aa	Predicted RBP	10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	LY6E	Q16553	131 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	LY6G6F	Q5SQ64	297 aa		10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	SLC25A48	Q6ZT89	311 aa	Known RBP	10.79	□□□□□ -0.68
KIFC3-233	ENST00000569222	OR4F5	Q8NH21	305 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms