RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MICU1Q9BPX6 476 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 TRAF4Q9BUZ4 470 aaPredicted RBP6.58□□□□□ -1.36
CDH11-216ENST00000569128 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 OR51I2Q9H344 312 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 METTL17Q9H7H0 456 aaPredicted RBP6.58□□□□□ -1.36
CDH11-216ENST00000569128 DYNLRB1Q9NP97 96 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 CBLN4Q9NTU7 201 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 ING4Q9UNL4 249 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 CACNG2Q9Y698 323 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 ARFGEF3Q5TH69 2177 aa6.58□□□□□ -1.36
CDH11-216ENST00000569128 RAI1Q7Z5J4 1906 aaPredicted RBP6.58□□□□□ -1.36
CDH11-216ENST00000569128 HRNRQ86YZ3 2850 aaPredicted RBP6.58□□□□□ -1.36
CDH11-216ENST00000569128 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 IFITM5A6NNB3 132 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 LYNX1G3V0Z9 82 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 SLC17A2O00624 439 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 CDIPTO14735 213 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE7O76087 117 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 LY6HO94772 140 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 SFTPBP07988 381 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 LYNX1P0DP58 116 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 CD200P41217 278 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 PTGFRP43088 359 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 HAAOP46952 286 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 NPBWR2P48146 333 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 RBP2P50120 134 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 RORCP51449 518 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 EFNB2P52799 333 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE1Q13065 139 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAGE4Q13068 117 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 ZNF154Q13106 437 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 RAB11BQ15907 218 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 MOGQ16653 247 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 FAM76BQ5HYJ3 339 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 FAM201AQ5SY85 155 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GLIPR1L1Q6UWM5 242 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 CCBE1Q6UXH8 406 aaPredicted RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 SLC25A26Q70HW3 274 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 GLCCI1Q86VQ1 547 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 FTMTQ8N4E7 242 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 OR51D1Q8NGF3 324 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 TNFAIP8L1Q8WVP5 186 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 ITFG2Q969R8 447 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 SEH1LQ96EE3 360 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 C1orf147Q96MC9 270 aaPredicted RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 GAL3ST1Q99999 423 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 SLIRPQ9GZT3 109 aaKnown RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 SLC22A4Q9H015 551 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 PLGRKTQ9HBL7 147 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 NEK6Q9HC98 313 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 ZNF701Q9NV72 531 aaPredicted RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 OR5V1Q9UGF6 321 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 MRPS28Q9Y2Q9 187 aaKnown RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 MAB21L2Q9Y586 359 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
CDH11-216ENST00000569128 CHD3Q12873 2000 aaKnown RBP6.57□□□□□ -1.36
CDH11-216ENST00000569128 LRRK2Q5S007 2527 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 HELZ2Q9BYK8 2649 aaKnown RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 OR5B21A6NL26 309 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 AIPO00170 330 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 AKR7A2O43488 359 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 TFF1P04155 84 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 ERCC1P07992 297 aaPredicted RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 BCL3P20749 454 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 COL8A2P25067 703 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 HTR2CP28335 458 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 SNRPD2P62316 118 aaKnown RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 QRFPP83859 136 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 MADCAM1Q13477 382 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 AWAT2Q6E213 333 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 OR4A47Q6IF82 309 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 CDH26Q8IXH8 852 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 SPERTQ8NA61 448 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 TMEM104Q8NE00 496 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 C19orf18Q8NEA5 215 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 OR51F2Q8NH61 342 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 LGALS14Q8TCE9 139 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 AQP3Q92482 292 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 YIPF5Q969M3 257 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 FAM3DQ96BQ1 224 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 URB1-AS1Q96HZ7 61 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 TECTBQ96PL2 329 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 MIXL1Q9H2W2 232 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 BANF2Q9H503 90 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 ELL3Q9HB65 397 aaPredicted RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 C1orf123Q9NWV4 160 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 MTCH1Q9NZJ7 389 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 CCDC59Q9P031 241 aaKnown RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 ZNF581Q9P0T4 197 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 COMMD3Q9UBI1 195 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 CACNA1DQ01668 2161 aa6.56□□□□□ -1.36
CDH11-216ENST00000569128 USP9YO00507 2555 aaPredicted RBP6.56□□□□□ -1.36
CDH11-216ENST00000569128 DSCAMO60469 2012 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 TEX13DA0A0J9YY54 714 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms