RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	LGALS1	P09382	135 aa	Known RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	C21orf33	P30042	268 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	GALE	Q14376	348 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	CDK5R1	Q15078	307 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	DHRSX	Q8N5I4	330 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	RPP25L	Q8N5L8	163 aa	Known RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	OR10H4	Q8NGA5	316 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	GATAD1	Q8WUU5	269 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	ADAT3	Q96EY9	351 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	NABP2	Q9BQ15	211 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	RSRP1	Q9BUV0	290 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	TMED9	Q9BVK6	235 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	TUBA4B	Q9H853	241 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	PARP11	Q9NR21	331 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	WARS2	Q9UGM6	360 aa	Known RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	MRPS28	Q9Y2Q9	187 aa	Known RBP	12.93	□□□□□ -0.34
PKM-223	ENST00000569050	TRAV39	A0A0B4J263	110 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	TRAV41	A0A0B4J266	112 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	ATF1	P18846	271 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	ATP6V1E1	P36543	226 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	CAPG	P40121	348 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	SNRPG	P62308	76 aa	Known RBP	12.92	□□□□□ -0.34
PKM-223	ENST00000569050	ZNF691	Q5VV52	312 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	RNLS	Q5VYX0	342 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	ANKRD13B	Q86YJ7	626 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	OR10A7	Q8NGE5	316 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	OR5D18	Q8NGL1	313 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	CNIH3	Q8TBE1	160 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	CASTOR1	Q8WTX7	329 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	APH1B	Q8WW43	257 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	TRUB1	Q8WWH5	349 aa	Known RBP	12.92	□□□□□ -0.34
PKM-223	ENST00000569050	PP6455	Q8WZ26	134 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	RFK	Q969G6	155 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	RNF166	Q96A37	237 aa	Predicted RBP	12.92	□□□□□ -0.34
PKM-223	ENST00000569050	NCOR1P1	Q9H4R4	102 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	ZCCHC4	Q9H5U6	513 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	CLN6	Q9NWW5	311 aa		12.92	□□□□□ -0.34
PKM-223	ENST00000569050	LOC107986453	A0A1B0GWG9	222 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050		H0YJX3	145 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	SOX15	O60248	233 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	GNAO1	P09471	354 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	GABRB1	P18505	474 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	SMN1	Q16637	294 aa	Known RBP	12.91	□□□□□ -0.34
PKM-223	ENST00000569050	RSBN1	Q5VWQ0	802 aa	Predicted RBP	12.91	□□□□□ -0.34
PKM-223	ENST00000569050	TTC23	Q5W5X9	447 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	IZUMO2	Q6UXV1	221 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	SSX6	Q7RTT6	188 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	LINC00311	Q8N616	119 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	YIPF7	Q8N8F6	280 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	MINDY2	Q8NBR6	621 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	C10orf35	Q96D05	121 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	SPACA5	Q96QH8	159 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	THAP7	Q9BT49	309 aa	Predicted RBP	12.91	□□□□□ -0.34
PKM-223	ENST00000569050	VCX3B	Q9H321	246 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	AMBN	Q9NP70	447 aa		12.91	□□□□□ -0.34
PKM-223	ENST00000569050	IGHV7-81	A0A0B4J1V7	117 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	TRAV24	A0A0B4J272	114 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	ZNF670-ZNF695	F2Z2N8	137 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	BRI3	O95415	125 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	PRKACB	P22694	351 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	ADARB1	P78563	741 aa	Known RBP	12.9	□□□□□ -0.34
PKM-223	ENST00000569050	RIPK1	Q13546	671 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	PAN3	Q58A45	887 aa	Known RBP	12.9	□□□□□ -0.34
PKM-223	ENST00000569050	MEDAG	Q5VYS4	303 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	LINC00322	Q6ZN03	302 aa	Predicted RBP	12.9	□□□□□ -0.34
PKM-223	ENST00000569050	RDH10	Q8IZV5	341 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	PRSS35	Q8N3Z0	413 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	SETD9	Q8NE22	299 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	CCDC54	Q8NEL0	328 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	PLPPR1	Q8TBJ4	325 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	OPALIN	Q96PE5	141 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	ELOVL1	Q9BW60	279 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	CEPT1	Q9Y6K0	416 aa		12.9	□□□□□ -0.34
PKM-223	ENST00000569050	IGHV3-11	P01762	117 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	HSPB1	P04792	205 aa	Known RBP	12.89	□□□□□ -0.35
PKM-223	ENST00000569050	DBT	P11182	482 aa	Known RBP	12.89	□□□□□ -0.35
PKM-223	ENST00000569050	FST	P19883	344 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	BLVRB	P30043	206 aa	Predicted RBP	12.89	□□□□□ -0.35
PKM-223	ENST00000569050	VHL	P40337	213 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	MMD	Q15546	238 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	C19orf54	Q5BKX5	351 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	UTS2B	Q765I0	119 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.89	□□□□□ -0.35
PKM-223	ENST00000569050	RHOXF1	Q8NHV9	184 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	SPSB1	Q96BD6	273 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050		Q96MT0	163 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	MYRF	Q9Y2G1	1151 aa		12.89	□□□□□ -0.35
PKM-223	ENST00000569050	DNAH6	Q9C0G6	4158 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050		A0A1W2PQL4	384 aa	Predicted RBP	12.88	□□□□□ -0.35
PKM-223	ENST00000569050	SNTN	A6NMZ2	147 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	SLC31A2	O15432	143 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	WBP4	O75554	376 aa	Known RBP	12.88	□□□□□ -0.35
PKM-223	ENST00000569050	HLA-DRB1	P01911	266 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	PAX5	Q02548	391 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	SLC25A30	Q5SVS4	291 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	UBALD1	Q8TB05	177 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	FLYWCH2	Q96CP2	140 aa	Known RBP	12.88	□□□□□ -0.35
PKM-223	ENST00000569050	LGALS12	Q96DT0	336 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	ST6GALNAC5	Q9BVH7	336 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	BARHL1	Q9BZE3	327 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms