RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 TRAV39A0A0B4J263 110 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 SHISA3A0PJX4 238 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 METTL21EPA6NDL7 271 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 C12orf77C9JDV5 145 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 C15orf65H3BRN8 121 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 J3QR06 171 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 HAX1O00165 279 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 NDUFA7O95182 113 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 LPLP06858 475 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 RAB6AP20340 208 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 IL3RAP26951 378 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 BRS3P32247 399 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 MNDAP41218 407 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 VEGFCP49767 419 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 GNG10P50151 68 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 MADCAM1Q13477 382 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 C2orf76Q3KRA6 126 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 PRR18Q8N4B5 295 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 FAM89BQ8N5H3 189 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 OR10X1Q8NGY0 326 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 MRPL30Q8TCC3 161 aaKnown RBP10.51□□□□□ -0.73
CLK3-224ENST00000568605 TOMM40LQ969M1 308 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 PTX4Q96A99 478 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 RPEQ96AT9 228 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 AJUBAQ96IF1 538 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 SULT4A1Q9BR01 284 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 BEX1Q9HBH7 125 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
CLK3-224ENST00000568605 ABRACLQ9P1F3 81 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 GNG12Q9UBI6 72 aa10.51□□□□□ -0.73
CLK3-224ENST00000568605 POM121CA8CG34 1229 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 BUB1B-PAK6H3BSN5 160 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 SCGNO76038 276 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 SCAND1P57086 179 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 ARL6IP1Q15041 203 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 LY6EQ16553 131 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 SFXN4Q6P4A7 337 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 BAIAP2L2Q6UXY1 529 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 Q6ZTK2 550 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 AKR1E2Q96JD6 320 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
CLK3-224ENST00000568605 C12orf4Q9NQ89 552 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 GFOD1Q9NXC2 390 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 C1RLQ9NZP8 487 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 JPT1Q9UK76 154 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 PSG11Q9UQ72 335 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 TCF19Q9Y242 345 aa10.5□□□□□ -0.73
CLK3-224ENST00000568605 TET2Q6N021 2002 aaPredicted RBP10.5□□□□□ -0.73
CLK3-224ENST00000568605 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 SMIM30A4D0T7 59 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 TRIM64CA6NLI5 447 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 LDLRAD4O15165 306 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 SOCS1O15524 211 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 AIREO43918 545 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 TMEM127O75204 238 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 RGS11O94810 467 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 HBZP02008 142 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 JUNBP17275 347 aaPredicted RBP10.49□□□□□ -0.73
CLK3-224ENST00000568605 SDC2P34741 201 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 RAB7AP51149 207 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 MXD1Q05195 221 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 CROCCP3Q8IVE0 287 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 DYNAPQ8N1N2 210 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 CAPSLQ8WWF8 208 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 RAB3CQ96E17 227 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 FAAP24Q9BTP7 215 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 DAPK2Q9UIK4 370 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 MMP24Q9Y5R2 645 aa10.49□□□□□ -0.73
CLK3-224ENST00000568605 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 IGHV3-43A0A0B4J1X8 118 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 TXNL1O43396 289 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 NAPSAO96009 420 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 CD3GP09693 182 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 IGHV3-43DP0DP04 118 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 RCC1P18754 421 aaPredicted RBP10.48□□□□□ -0.73
CLK3-224ENST00000568605 MDKP21741 143 aaPredicted RBP10.48□□□□□ -0.73
CLK3-224ENST00000568605 PAX6P26367 422 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 HMGN3Q15651 99 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 LDLRAD2Q5SZI1 272 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 STEAP3Q658P3 488 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 C16orf82Q7Z2V1 217 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 OR8H3Q8N146 312 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 LINC00311Q8N616 119 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 OR10R2Q8NGX6 335 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 UBALD1Q8TB05 177 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 PHF21AQ96BD5 680 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 GALMQ96C23 342 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 ARHGAP5-AS1Q96IT6 56 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 CMSS1Q9BQ75 279 aaKnown RBP10.48□□□□□ -0.73
CLK3-224ENST00000568605 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms