RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C22orf34Q6ZV56 151 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 OR11L1Q8NGX0 322 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 PDCD10Q9BUL8 212 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 SUCNR1Q9BXA5 334 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 AKAP6Q13023 2319 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 RFPL4AA6NLU0 287 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 RFPL4AL1F8VTS6 287 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 SPRY3O43610 288 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 B3GALNT1O75752 331 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 SCTP09683 121 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 TNFRSF1AP19438 455 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 PIGPP57054 158 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 TNFAIP6P98066 277 aaPredicted RBP12.26□□□□□ -0.45
COMMD4-221ENST00000567935 HMGN3Q15651 99 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 FAM209AQ5JX71 171 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 DCAF12L2Q5VW00 463 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 KCTD9Q7L273 389 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 ZNF565Q8N9K5 539 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 OR11H4Q8NGC9 324 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 OR5T2Q8NGG2 359 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 OR10J5Q8NHC4 309 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 GRPEL2Q8TAA5 225 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 TOMM40LQ969M1 308 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 KIRREL1Q96J84 757 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 NMES1Q9C002 83 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 NCOR1P1Q9H4R4 102 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 NAA60Q9H7X0 242 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 OR14J1Q9UGF5 321 aa12.26□□□□□ -0.45
COMMD4-221ENST00000567935 CHD3Q12873 2000 aaKnown RBP12.25□□□□□ -0.45
COMMD4-221ENST00000567935 SIX6O95475 246 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 LHBP01229 141 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 IGHV1-46P01743 117 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 HEXAP06865 529 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 OR4A8P0C604 315 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 SLC25A4P12235 298 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 PI3P19957 117 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 NFYAP23511 347 aaPredicted RBP12.25□□□□□ -0.45
COMMD4-221ENST00000567935 FXYD4P59646 89 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 IFITM2Q01629 132 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 SLC9A3R2Q15599 337 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 ADIPOQQ15848 244 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 NDUFA5Q16718 116 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 TMEM65Q6PI78 240 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 LRTM2Q8N967 370 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 PLPPR1Q8TBJ4 325 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 FAM216AQ8WUB2 273 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 ITLN1Q8WWA0 313 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 RTN4IP1Q8WWV3 396 aaPredicted RBP12.25□□□□□ -0.45
COMMD4-221ENST00000567935 C18orf12Q96KH6 178 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 RNF7Q9UBF6 113 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 DNAJB11Q9UBS4 358 aa12.25□□□□□ -0.45
COMMD4-221ENST00000567935 IGHV3-64DA0A0J9YX35 117 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 OOEPA6NGQ2 149 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 GPR31O00270 319 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 WNT9BO14905 357 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 BET1O15155 118 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 IFNA21P01568 189 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 CD3EP07766 207 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 IRF2P14316 349 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 PRDX2P32119 198 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 BEX5Q5H9J7 111 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 ZNF767PQ75MW2 155 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 MOGAT3Q86VF5 341 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
COMMD4-221ENST00000567935 GCSAMQ8N6F7 178 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 SNX22Q96L94 193 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 EGLN1Q9GZT9 426 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 RAB9BQ9NP90 201 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 KCNJ16Q9NPI9 418 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 PLSCR3Q9NRY6 295 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
COMMD4-221ENST00000567935 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 OR2W1Q9Y3N9 320 aa12.24□□□□□ -0.45
COMMD4-221ENST00000567935 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 C17orf100A8MU93 164 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 M0R233 179 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 MGST3O14880 152 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 PSPNO60542 156 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 WNT2P09544 360 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 PSG2P11465 335 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-221ENST00000567935 SERPINF1P36955 418 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 OR3A1P47881 315 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 COL10A1Q03692 680 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-221ENST00000567935 EFNB3Q15768 340 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 ANKRD55Q3KP44 614 aa12.23□□□□□ -0.45
COMMD4-221ENST00000567935 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms