RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 TAS2R43P59537 309 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 KRTAP10-11P60412 298 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 SMN1Q16637 294 aaKnown RBP21.83■■□□□ 1.09
UBFD1-206ENST00000566669 PNLIPRP3Q17RR3 467 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 TTC23Q5W5X9 447 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 DMKNQ6E0U4 476 aaPredicted RBP21.83■■□□□ 1.09
UBFD1-206ENST00000566669 Q8N6K4 173 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 ST6GALNAC6Q969X2 333 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 P2RX4Q99571 388 aa21.83■■□□□ 1.09
UBFD1-206ENST00000566669 RCC2Q9P258 522 aaKnown RBP21.83■■□□□ 1.09
UBFD1-206ENST00000566669 TRAV39A0A0B4J263 110 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 GLAP06280 429 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 GPR12P47775 334 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 ZNF137PP52743 207 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 C8orf86Q6ZUL3 223 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 TMEM80Q96HE8 168 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.82■■□□□ 1.08
UBFD1-206ENST00000566669 TRAPPC2LQ9UL33 140 aa21.82■■□□□ 1.08
UBFD1-206ENST00000566669 A0A1W2PPE3 182 aa21.81■■□□□ 1.08
UBFD1-206ENST00000566669 CXorf66Q5JRM2 361 aaPredicted RBP21.81■■□□□ 1.08
UBFD1-206ENST00000566669 ZNF554Q86TJ5 538 aa21.81■■□□□ 1.08
UBFD1-206ENST00000566669 TMEM104Q8NE00 496 aa21.81■■□□□ 1.08
UBFD1-206ENST00000566669 RASL11BQ9BPW5 248 aa21.81■■□□□ 1.08
UBFD1-206ENST00000566669 ZNF580Q9UK33 172 aa21.81■■□□□ 1.08
UBFD1-206ENST00000566669 WI2-2373I1.2A0A1W2PRP0 233 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 H0YHG0 523 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 ELANEP08246 267 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 REG1BP48304 166 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 FOXE3Q13461 319 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 SLC25A48Q6ZT89 311 aaKnown RBP21.8■■□□□ 1.08
UBFD1-206ENST00000566669 Q8N9W7 124 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 OR8U1Q8NH10 309 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 CCDC107Q8WV48 283 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 CHCHD6Q9BRQ6 235 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 GNG12Q9UBI6 72 aa21.8■■□□□ 1.08
UBFD1-206ENST00000566669 MRPS28Q9Y2Q9 187 aaKnown RBP21.8■■□□□ 1.08
UBFD1-206ENST00000566669 SIRT4Q9Y6E7 314 aaPredicted RBP21.8■■□□□ 1.08
UBFD1-206ENST00000566669 RAMP3O60896 148 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 BAG2O95816 211 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 OR5H8P0DN80 308 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 HOXD3P31249 432 aaPredicted RBP21.79■■□□□ 1.08
UBFD1-206ENST00000566669 CDX1P47902 265 aaPredicted RBP21.79■■□□□ 1.08
UBFD1-206ENST00000566669 CD69Q07108 199 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 GAPTQ8N292 157 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 RNF152Q8N8N0 203 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 B9D2Q9BPU9 175 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 ETAA1Q9NY74 926 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 ZNF581Q9P0T4 197 aa21.79■■□□□ 1.08
UBFD1-206ENST00000566669 GPR50Q13585 617 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 SYT6Q5T7P8 510 aaPredicted RBP21.78■■□□□ 1.08
UBFD1-206ENST00000566669 RAB12Q6IQ22 244 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 JAGN1Q8N5M9 183 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 PACRGLQ8N7B6 248 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 NKAIN3Q8N8D7 197 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 S1PR3Q99500 378 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 LINC00527Q9UJ94 153 aa21.78■■□□□ 1.08
UBFD1-206ENST00000566669 COL7A1Q02388 2944 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 IGHV3-72A0A0B4J1Y9 119 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 C12orf77C9JDV5 145 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 CCL24O00175 119 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 DGCR2P98153 550 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 GLIPR1L1Q6UWM5 242 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 GHRLQ9UBU3 117 aa21.77■■□□□ 1.08
UBFD1-206ENST00000566669 TRBV5-7A0A0A0MS05 114 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 EFCAB10A6NFE3 127 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 EBAG9O00559 213 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 SC5DO75845 299 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 CD1AP06126 327 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 FUT3P21217 361 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 MAPK3P27361 379 aaPredicted RBP21.76■■□□□ 1.07
UBFD1-206ENST00000566669 SOX6P35712 828 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 RPS11P62280 158 aaKnown RBP eCLIP21.76■■□□□ 1.07
UBFD1-206ENST00000566669 DOC2BQ14184 412 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 KIR2DS1Q14954 304 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 AWAT2Q6E213 333 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 ZNF439Q8NDP4 499 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 MUL1Q969V5 352 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 PGLYRP3Q96LB9 341 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 DCLRE1BQ9H816 532 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 PLSCR3Q9NRY6 295 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 KCNIP1Q9NZI2 227 aa21.76■■□□□ 1.07
UBFD1-206ENST00000566669 TRAV8-7A0A075B6U6 113 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 LANCL1O43813 399 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 VDAC1P21796 283 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 CAPGP40121 348 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 FAM71E2Q8N5Q1 922 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 ZNF485Q8NCK3 441 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 OR5M8Q8NGP6 311 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 OR13C5Q8NGS8 318 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 UQCC2Q9BRT2 126 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 CNOT2Q9NZN8 540 aaKnown RBP21.75■■□□□ 1.07
UBFD1-206ENST00000566669 CLEC2DQ9UHP7 191 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 LRRC42Q9Y546 428 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 PEX16Q9Y5Y5 336 aa21.75■■□□□ 1.07
UBFD1-206ENST00000566669 IGHV3-43A0A0B4J1X8 118 aa21.74■■□□□ 1.07
UBFD1-206ENST00000566669 A0A1W2PP11 408 aa21.74■■□□□ 1.07
UBFD1-206ENST00000566669 LALBAP00709 142 aa21.74■■□□□ 1.07
UBFD1-206ENST00000566669 IGHG4P01861 327 aa21.74■■□□□ 1.07
UBFD1-206ENST00000566669 HBZP02008 142 aa21.74■■□□□ 1.07
UBFD1-206ENST00000566669 IGF1P05019 195 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms