RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 OR4C45A6NMZ5 311 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 AP4M1O00189 453 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 SIRPB1O00241 398 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 KDM4BO94953 1096 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 PSMA1P25786 263 aaKnown RBP9.98□□□□□ -0.81
RNF40-208ENST00000565995 ALDH3B2P48448 385 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 CFHR3Q02985 330 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 TRAM1Q15629 374 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 SSX1Q16384 188 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 YIF1BQ5BJH7 314 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 TMEM244Q5VVB8 128 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 UTS2BQ765I0 119 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 TGIF2LXQ8IUE1 241 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 RDH10Q8IZV5 341 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 OR13F1Q8NGS4 319 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 OR13C3Q8NGS6 347 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 OR13C5Q8NGS8 318 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
RNF40-208ENST00000565995 ABCG5Q9H222 651 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 OR6C3Q9NZP0 311 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 DHDHQ9UQ10 334 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 HYDINQ4G0P3 5121 aa9.98□□□□□ -0.81
RNF40-208ENST00000565995 IGKV1-12A0A0C4DH73 117 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 LOC100506127A0A0U1RQW1 187 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 NPIPB11E5RHQ5 1161 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 SLC33A1O00400 549 aaPredicted RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 IGKV1D-12P01611 117 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 OCM2P0CE71 109 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 ZNF20P17024 532 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 SOX2P48431 317 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 MTCP1P56278 107 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 RAB25P57735 213 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 PAX5Q02548 391 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 ZNF816Q0VGE8 651 aaPredicted RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 MADCAM1Q13477 382 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 GPR50Q13585 617 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 DIAPH2-AS1Q14236 149 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 RBM39Q14498 530 aaKnown RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 TIMM50Q3ZCQ8 353 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 CXorf66Q5JRM2 361 aaPredicted RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 KRBOX4Q5JUW0 171 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 GPR107Q5VW38 600 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 LHFPL2Q6ZUX7 228 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 CLVS1Q8IUQ0 354 aaPredicted RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 SAXO1Q8IYX7 474 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 MS4A15Q8N5U1 240 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 Q8N6K4 173 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 OR10A7Q8NGE5 316 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 C4orf3Q8WVX3 66 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 PGLYRP3Q96LB9 341 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 CITED4Q96RK1 184 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 CHCHD6Q9BRQ6 235 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 LIN7CQ9NUP9 197 aaKnown RBP9.97□□□□□ -0.81
RNF40-208ENST00000565995 STUB1Q9UNE7 303 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 PSG11Q9UQ72 335 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 GSTK1Q9Y2Q3 226 aa9.97□□□□□ -0.81
RNF40-208ENST00000565995 IGKV1D-33P01593 117 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 IGKV1-33P01594 117 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 IGHG4P01861 327 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 CD1AP06126 327 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 CD2P06729 351 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 CALCBP10092 127 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 ATF1P18846 271 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 PRKACBP22694 351 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 GADD45AP24522 165 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 MAPK3P27361 379 aaPredicted RBP9.96□□□□□ -0.82
RNF40-208ENST00000565995 GPR12P47775 334 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 HES1Q14469 280 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 ZNF565Q8N9K5 539 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 OR51A4Q8NGJ6 313 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 OR51T1Q8NGJ9 327 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 OR10AC1Q8NH08 325 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 RGP1Q92546 391 aaPredicted RBP9.96□□□□□ -0.82
RNF40-208ENST00000565995 SPSB1Q96BD6 273 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 YIPF6Q96EC8 236 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 OR14A2Q96R54 314 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 FUNDC2Q9BWH2 189 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 PLSCR3Q9NRY6 295 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 SSR3Q9UNL2 185 aa9.96□□□□□ -0.82
RNF40-208ENST00000565995 TNCP24821 2201 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 AIREO43918 545 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 ISG15P05161 165 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 NFYBP25208 207 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 PSMB8P28062 276 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 POU3F4P49335 361 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
RNF40-208ENST00000565995 RUNX1Q01196 453 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 FABP5Q01469 135 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 HNF4GQ14541 408 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 ZNF260Q3ZCT1 412 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 Q499Y3 187 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 CEACAM19Q7Z692 300 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 IZUMO1Q8IYV9 350 aa9.95□□□□□ -0.82
RNF40-208ENST00000565995 FAM71E2Q8N5Q1 922 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms