RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 VGLL3A8MV65 326 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 J3QR06 171 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 RAB27BO00194 218 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 MMP23AO75900 390 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 RGS11O94810 467 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 GABARAPO95166 117 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 RNASE1P07998 156 aaKnown RBP10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 MELTFP08582 738 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 CD3GP09693 182 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 CLEC2LP0C7M8 214 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 OMGP23515 440 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 SERPINB10P48595 397 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 RORCP51449 518 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 TMBIM6P55061 237 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 DLX1P56177 255 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 UBA52P62987 128 aaKnown RBP10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 SLC9A3R2Q15599 337 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 GPR107Q5VW38 600 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 CCDC144NLQ6NUI1 221 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 C16orf87Q6PH81 154 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 RFESDQ8TAC1 157 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 ACOT12Q8WYK0 555 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 DYRK2Q92630 601 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 CMSS1Q9BQ75 279 aaKnown RBP10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 TAF9BQ9HBM6 251 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 C12orf4Q9NQ89 552 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNRD1Q9P1U0 126 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 AK3Q9UIJ7 227 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 SMIM30A4D0T7 59 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 DNAJC9-AS1A6NH13 148 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 C12orf77C9JDV5 145 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 BUB1B-PAK6H3BSN5 160 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 SDCBPO00560 298 aaPredicted RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 NOL3O60936 208 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 HBZP02008 142 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 HIST1H1DP16402 221 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 RCC1P18754 421 aaPredicted RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 SSTR5P35346 364 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 TALDO1P37837 337 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 DYNLT3P51808 116 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 EFNB2P52799 333 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 VBP1P61758 197 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 CTF1Q16619 201 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 PLAC9Q5JTB6 97 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 LINC00311Q8N616 119 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 NDNFQ8TB73 568 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 RAB2BQ8WUD1 216 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 AP3S1Q92572 193 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 S100A16Q96FQ6 103 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 MMP28Q9H239 520 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 GHITMQ9H3K2 345 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 RAB18Q9NP72 206 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 OR2S2Q9NQN1 319 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 RHBDL2Q9NX52 303 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 GFOD1Q9NXC2 390 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 GNG12Q9UBI6 72 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 PSG11Q9UQ72 335 aa10.22□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A0B4J203 849 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 TRAV39A0A0B4J263 110 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 RNF212BA8MTL3 300 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 DIRAS3O95661 229 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 CRYBA1P05813 215 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 LPLP06858 475 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 IL3RAP26951 378 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 BRS3P32247 399 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 KIR2DS4P43632 304 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 LOXL3P58215 753 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 NCS1P62166 190 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 MADCAM1Q13477 382 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 ARFRP1Q13795 201 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 KIR2DS1Q14954 304 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 HLA-DRB5Q30154 266 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 CDNFQ49AH0 187 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 OR4P4Q8NGL7 312 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 LGALS14Q8TCE9 139 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 SSX3Q99909 188 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 OCSTAMPQ9BR26 566 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 ABCG5Q9H222 651 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 DCSTAMPQ9H295 470 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF286AQ9HBT8 521 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 ESM1Q9NQ30 184 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 ABCB10Q9NRK6 738 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 JPT1Q9UK76 154 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 PITPNC1Q9UKF7 332 aa10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.77
SHCBP1-204ENST00000565887 SMIM31A0A1B0GVY4 71 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms