RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 SOX2P48431 317 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
COMMD4-211ENST00000564815 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-211ENST00000564815 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF529Q6P280 563 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 GNG12Q9UBI6 72 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 SCOCQ9UIL1 159 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF580Q9UK33 172 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
COMMD4-211ENST00000564815 RPL36Q9Y3U8 105 aaKnown RBP11.13□□□□□ -0.63
COMMD4-211ENST00000564815 C15orf65H3BRN8 121 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 AIPO00170 330 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 GEMIN2O14893 280 aaKnown RBP11.12□□□□□ -0.63
COMMD4-211ENST00000564815 BAG2O95816 211 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 IGF1P05019 195 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 ALDH3A2P51648 485 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 CCDC58Q4VC31 144 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 RPL22L1Q6P5R6 122 aaKnown RBP11.12□□□□□ -0.63
COMMD4-211ENST00000564815 TRAT1Q6PIZ9 186 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 OR51A2Q8NGJ7 313 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF107Q9UII5 783 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-211ENST00000564815 VSIG4Q9Y279 399 aa11.12□□□□□ -0.63
COMMD4-211ENST00000564815 E9PI62 339 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 EI24O14681 340 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 SERPINA2P20848 420 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 PSMB8P28062 276 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 BDKRB2P30411 391 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 F2RL1P55085 397 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 DDI2Q5TDH0 399 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 TMPRSS11AQ6ZMR5 421 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
COMMD4-211ENST00000564815 TMEM104Q8NE00 496 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 TMEM106AQ96A25 262 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 AMBNQ9NP70 447 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 SORL1Q92673 2214 aa11.11□□□□□ -0.63
COMMD4-211ENST00000564815 IGHV3-43A0A0B4J1X8 118 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 ERICH4A6NGS2 130 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 LANCL1O43813 399 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 IGHV3-43DP0DP04 118 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 FHL3Q13643 280 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 NKAPLQ5M9Q1 402 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-211ENST00000564815 FAM71E2Q8N5Q1 922 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 RHOXF1Q8NHV9 184 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 MRPS24Q96EL2 167 aaKnown RBP11.1□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF251Q9BRH9 671 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 GHITMQ9H3K2 345 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 KCNIP1Q9NZI2 227 aa11.1□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-211ENST00000564815 CA11O75493 328 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-211ENST00000564815 ZNF137PP52743 207 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 RUNX1Q01196 453 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 CFHR3Q02985 330 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 MMDQ15546 238 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 CT45A1Q5HYN5 189 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 CT45A3Q8NHU0 189 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
COMMD4-211ENST00000564815 ETAA1Q9NY74 926 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
COMMD4-211ENST00000564815 RYR3Q15413 4870 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 IRGMA1A4Y4 181 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 C12orf77C9JDV5 145 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 GLAP06280 429 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 GABRB1P18505 474 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 MED21Q13503 144 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 RIPK1Q13546 671 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 PRR18Q8N4B5 295 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 ZNF184Q99676 751 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-211ENST00000564815 C9orf16Q9BUW7 83 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 PALMDQ9NP74 551 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 LRRC42Q9Y546 428 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
COMMD4-211ENST00000564815 LOC100130705A0A1B0GUX0 176 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms