RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OR10V1Q8NGI7 309 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 HSPB9Q9BQS6 159 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 IFT22Q9H7X7 185 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 RAB9BQ9NP90 201 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 TRAPPC2LQ9UL33 140 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 RPL36Q9Y3U8 105 aaKnown RBP10.17□□□□□ -0.78
SF3B3-202ENST00000562722 LSM4Q9Y4Z0 139 aaKnown RBP10.17□□□□□ -0.78
SF3B3-202ENST00000562722 SLC31A2O15432 143 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF780AO75290 641 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 IGHG4P01861 327 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 MT-ND4P03905 459 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 OR5H8P0DN80 308 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 SLC2A2P11168 524 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 GTF2F2P13984 249 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 GABRB1P18505 474 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 MYF6P23409 242 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 NKAPLQ5M9Q1 402 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 RPL22L1Q6P5R6 122 aaKnown RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 TMEM65Q6PI78 240 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF497Q6ZNH5 498 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 RNF152Q8N8N0 203 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 TMEM104Q8NE00 496 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 OR11H1Q8NG94 326 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 RBMXL1Q96E39 390 aaKnown RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 KCTD7Q96MP8 289 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 PLSCR3Q9NRY6 295 aa10.16□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF256Q9Y2P7 627 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-202ENST00000562722 A0A1W2PP11 408 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 C12orf77C9JDV5 145 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 MCRIP1C9JLW8 97 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 F2RL1P55085 397 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 CFHR3Q02985 330 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 RIPK1Q13546 671 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 MMDQ15546 238 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 C6orf183Q5T699 404 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 SYT6Q5T7P8 510 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-202ENST00000562722 TMPRSS11AQ6ZMR5 421 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 SLC25A48Q6ZT89 311 aaKnown RBP10.15□□□□□ -0.78
SF3B3-202ENST00000562722 FAM71E2Q8N5Q1 922 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 OR4K15Q8NH41 348 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 RHOXF1Q8NHV9 184 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 ST6GALNAC6Q969X2 333 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 ORAI1Q96D31 301 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 OR5B12Q96R08 314 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF184Q99676 751 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-202ENST00000562722 SPACA1Q9HBV2 294 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 ETAA1Q9NY74 926 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 CKLFQ9UBR5 152 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 SCOCQ9UIL1 159 aa10.15□□□□□ -0.78
SF3B3-202ENST00000562722 C3orf84H3BNL1 204 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 LIMS3P0CW19 117 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 LIMS4P0CW20 117 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 GPR176Q14439 515 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 TMEM30BQ3MIR4 351 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 Q3ZCU0 254 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 CCDC58Q4VC31 144 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 XAF1Q6GPH4 301 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 ZFP1Q6P2D0 407 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 JAGN1Q8N5M9 183 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 OR1N2Q8NGR9 330 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 OR1L1Q8NH94 360 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 C9orf16Q9BUW7 83 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 PARP11Q9NR21 331 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 WSB1Q9Y6I7 421 aa10.14□□□□□ -0.79
SF3B3-202ENST00000562722 LOC100130705A0A1B0GUX0 176 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 H3BNX3 289 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 HBZP02008 142 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 IGF1P05019 195 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 OR8U8P0C7N1 319 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 PSMB8P28062 276 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 ETV1P50549 477 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF134P52741 427 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 LSAMPQ13449 338 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 FHL3Q13643 280 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 CT45A1Q5HYN5 189 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 FAM27D1Q5T7N8 215 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 OR2G6Q5TZ20 316 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 RAB12Q6IQ22 244 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 OR13C5Q8NGS8 318 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 CT45A3Q8NHU0 189 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 MUL1Q969V5 352 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 KCNIP1Q9NZI2 227 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 MRPS28Q9Y2Q9 187 aaKnown RBP10.13□□□□□ -0.79
SF3B3-202ENST00000562722 PEX16Q9Y5Y5 336 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 SMAD5-AS1Q9Y6J3 95 aa10.13□□□□□ -0.79
SF3B3-202ENST00000562722 G3V318 75 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 DYNC1I1O14576 645 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 MYL12AP19105 171 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 CHATP28329 748 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 INSL3P51460 131 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF137PP52743 207 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 SMN1Q16637 294 aaKnown RBP10.12□□□□□ -0.79
SF3B3-202ENST00000562722 AWAT2Q6E213 333 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 TRAT1Q6PIZ9 186 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms