RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 FBP1P09467 338 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 GTF2F2P13984 249 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 MGMTP16455 207 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 PSMB9P28065 219 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 HTR2CP28335 458 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 GABRA5P31644 462 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 CLDN12P56749 244 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 GPR176Q14439 515 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 RBM39Q14498 530 aaKnown RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 TBCEQ15813 527 aaPredicted RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 SSX2Q16385 188 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 C17orf58Q2M2W7 97 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 MIDNQ504T8 468 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 HES5Q5TA89 166 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 RSBN1Q5VWQ0 802 aaPredicted RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 FAM53AQ6NSI3 398 aaPredicted RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 C16orf87Q6PH81 154 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 NDNFQ8TB73 568 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 SSMEM1Q8WWF3 244 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 PHYHIPQ92561 330 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 CORO2AQ92828 525 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 SSX3Q99909 188 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 NICN1Q9BSH3 213 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 YTHDF1Q9BYJ9 559 aaKnown RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 SLITRK2Q9H156 845 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 TMEM133Q9H2Q1 129 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 GAL3ST2Q9H3Q3 398 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 ZNF286AQ9HBT8 521 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 ZNRD1Q9P1U0 126 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 UBE2J1Q9Y385 318 aaPredicted RBP4.69□□□□□ -1.66
CDH13-206ENST00000562601 LRRC42Q9Y546 428 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 HILPDAQ9Y5L2 63 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 PEX16Q9Y5Y5 336 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 SESN1Q9Y6P5 492 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 PKD1L1Q8TDX9 2849 aa4.69□□□□□ -1.66
CDH13-206ENST00000562601 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 IGHV2-26A0A0B4J1V2 119 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 IGHV3-43A0A0B4J1X8 118 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 A0A0B4J203 849 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 KBTBD11-OT1A0A1B0GTJ5 212 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 ZNF729A6NN14 1252 aaPredicted RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 ODF3BA8MYP8 253 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 MCRIP1C9JLW8 97 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 DIRC3C9JPN6 131 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CLDN34H7C241 214 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 TOR1AO14656 332 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 GPR137BO60478 399 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 ZNF780AO75290 641 aaPredicted RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 RBP4P02753 201 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CRYBA1P05813 215 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CSN2P05814 226 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CGB3P0DN86 165 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CGB7P0DN87 165 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 IGHV3-43DP0DP04 118 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 HKR1P10072 659 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 CD24P25063 80 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 SSTR5P35346 364 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 GNG10P50151 68 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 OR10A3P58181 314 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 SRSF4Q08170 494 aaKnown RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 PLA2G7Q13093 441 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 UNC119Q13432 240 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 TRAM1Q15629 374 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 NEDD8Q15843 81 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 FAM189A2Q15884 450 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 RAB11BQ15907 218 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 AWAT1Q58HT5 328 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 NHLRC3Q5JS37 347 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 C1orf100Q5SVJ3 147 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 SYT6Q5T7P8 510 aaPredicted RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 UBE2UQ5VVX9 321 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 SIGIRRQ6IA17 410 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 C22orf42Q6IC83 251 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 RAB12Q6IQ22 244 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 ZNF773Q6PK81 442 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 HEPN1Q6WQI6 88 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 LINC00596Q86U02 117 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 LDLRAD3Q86YD5 345 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CDH26Q8IXH8 852 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 ABHD12Q8N2K0 398 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 PRR18Q8N4B5 295 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 C3orf56Q8N813 242 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 NKAIN3Q8N8D7 197 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 BEND2Q8NDZ0 799 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 OR11H6Q8NGC7 330 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 OR51D1Q8NGF3 324 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 OR4K15Q8NH41 348 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 THRSPQ92748 146 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 UQCC2Q9BRT2 126 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 CLEC7AQ9BXN2 247 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 OR51E2Q9H255 320 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 DPAGT1Q9H3H5 408 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 RNF167Q9H6Y7 350 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 ZMAT3Q9HA38 289 aaKnown RBP4.68□□□□□ -1.66
CDH13-206ENST00000562601 PLGRKTQ9HBL7 147 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 TMEM140Q9NV12 185 aa4.68□□□□□ -1.66
CDH13-206ENST00000562601 NDUFB11Q9NX14 153 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms