RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CFHR2P36980 270 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 TAS2R30P59541 319 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 VAMP2P63027 116 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 ZNF273Q14593 569 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 SPATA46Q5T0L3 261 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 BHLHA15Q7RTS1 189 aaPredicted RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 SSX8Q7RTT4 187 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 MYPOPQ86VE0 399 aaPredicted RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 FAM219AQ8IW50 185 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 GCNT2Q8N0V5 402 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 OR52M1Q8NGK5 317 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 ZNF488Q96MN9 340 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 RAB40CQ96S21 281 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 NKX6-2Q9C056 277 aaPredicted RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 HIPK2Q9H2X6 1198 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 COA4Q9NYJ1 87 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 TRAPPC2LQ9UL33 140 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 COL6A3P12111 3177 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 SPEGQ15772 3267 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 BTBD17A6NE02 478 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 OOEPA6NGQ2 149 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 WRBO00258 174 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 TM4SF5O14894 197 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 KCNAB3O43448 404 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 SCO1O75880 301 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 TNFSF13O75888 250 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 DFFBO76075 338 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 SCAF4O95104 1147 aaKnown RBP8.2□□□□□ -1.1
RTF1-206ENST00000560447 SNAPINO95295 136 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 HAND1O96004 215 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 CD5P06127 495 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 SERPINE2P07093 398 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 CECR9P0C854 216 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 DVL1P1P54792 670 aaPredicted RBP8.2□□□□□ -1.1
RTF1-206ENST00000560447 EWSR1Q01844 656 aaKnown RBP eCLIP8.2□□□□□ -1.1
RTF1-206ENST00000560447 IGFBP7Q16270 282 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 SMIM21Q3B7S5 101 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 KRTCAP3Q53RY4 240 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 TIMM23BQ5SRD1 257 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 VWA1Q6PCB0 445 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 ACP7Q6ZNF0 438 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 C20orf204Q6ZNR8 217 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 PLPPR1Q8TBJ4 325 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 ERGIC1Q969X5 290 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 STARD4Q96DR4 205 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 GNPNAT1Q96EK6 184 aaPredicted RBP8.2□□□□□ -1.1
RTF1-206ENST00000560447 LRRC46Q96FV0 321 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 LURAP1Q96LR2 239 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 OR51B6Q9H340 312 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 NCOR1P1Q9H4R4 102 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 RAB9BQ9NP90 201 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 UQCC1Q9NVA1 299 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 DKK4Q9UBT3 224 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 ERRFI1Q9UJM3 462 aaPredicted RBP8.2□□□□□ -1.1
RTF1-206ENST00000560447 SLC25A15Q9Y619 301 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
RTF1-206ENST00000560447 VPS13AQ96RL7 3174 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 IGHV2OR16-5A0A0B4J2B6 119 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 F8W036 122 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 SIRPB1O00241 398 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 ABCD4O14678 606 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 CDIPTO14735 213 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 HSD17B6O14756 317 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 MLNRO43193 412 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 ADAM20O43506 726 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 TIMM8AO60220 97 aaPredicted RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 ZNF205O95201 554 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 LY86O95711 162 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 RCC1P18754 421 aaPredicted RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 MPV17P39210 176 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 LPAR6P43657 344 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 RPS23P62266 143 aaKnown RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 TCF15Q12870 199 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 TESK1Q15569 626 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 C1orf185Q5T7R7 199 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 Q6ZRG5 221 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 BATF2Q8N1L9 274 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 PPP1R35Q8TAP8 253 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 NARS2Q96I59 477 aaKnown RBP8.19□□□□□ -1.1
RTF1-206ENST00000560447 TAAR6Q96RI8 345 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 SFXN3Q9BWM7 321 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 ZDHHC8Q9ULC8 765 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 LAMP3Q9UQV4 416 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 MMP24Q9Y5R2 645 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 KPTNQ9Y664 436 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 WSB1Q9Y6I7 421 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 WDFY3Q8IZQ1 3526 aa8.19□□□□□ -1.1
RTF1-206ENST00000560447 IGHV1-18A0A0C4DH31 117 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 LOC105371267A0A1B0GV96 52 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 RNASEK-C17orf49H0YIS7 233 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 HSPB6O14558 160 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 TSPAN15O95858 294 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 OR8U8P0C7N1 319 aa8.18□□□□□ -1.1
RTF1-206ENST00000560447 NOVA1P51513 510 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms