RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	TET2	Q6N021	2002 aa	Predicted RBP	4.9	□□□□□ -1.62
LRRC49-223	ENST00000560369	APC2	O95996	2303 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	FAM24A	A6NFZ4	105 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	ZNF727	A8MUV8	499 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	UMAD1	C9J7I0	102 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	TRAPPC2L	H3BP13	241 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	KLRC4-KLRK1	H3BQV0	150 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	WNT9B	O14905	357 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	ATXN7	O15265	892 aa	Predicted RBP	4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	PPIH	O43447	177 aa	Known RBP	4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	TMEM50A	O95807	157 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	S100P	P25815	95 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	SNCA	P37840	140 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	MPV17	P39210	176 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	GLP1R	P43220	463 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	TNFSF10	P50591	281 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	CEBPG	P53567	150 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	OR2B11	Q5JQS5	317 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	SPIN3	Q5JUX0	258 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	FBXW9	Q5XUX1	488 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	TMEM211	Q6ICI0	200 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	EIF5AL1	Q6IS14	154 aa	Known RBP	4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	ZNF565	Q8N9K5	539 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	HSD17B11	Q8NBQ5	300 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369		Q8NFD4	153 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	PLPPR1	Q8TBJ4	325 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	GGACT	Q9BVM4	153 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	SCRT1	Q9BWW7	348 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	FAM86C1	Q9NVL1	165 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	ABI3	Q9P2A4	366 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	MMP24	Q9Y5R2	645 aa		4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
LRRC49-223	ENST00000560369	DSCAML1	Q8TD84	2053 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	C3orf85	A0A1B0GTC6	90 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	IFITM10	A6NMD0	228 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369		H7C1Q1	480 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	SIRPB1	O00241	398 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	MPPED1	O15442	326 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PRH1	P02810	166 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	FTH1P19	P0C7X4	201 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PET100	P0DJ07	73 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	OMG	P23515	440 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PPP1CC	P36873	323 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	EIF2S3	P41091	472 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	CAMLG	P49069	296 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RNF212	Q495C1	297 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PDZD11	Q5EBL8	140 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	TCTEX1D2	Q8WW35	142 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	IL1F10	Q8WWZ1	152 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	GALNT14	Q96FL9	552 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	LOXL4	Q96JB6	756 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RHOV	Q96L33	236 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	FER1L6-AS2	Q96M78	137 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	TRIB1	Q96RU8	372 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RARRES2	Q99969	163 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	OR51I2	Q9H344	312 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ZDHHC11	Q9H8X9	412 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	DLL3	Q9NYJ7	618 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	LUZP4	Q9P127	313 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	DNAJB11	Q9UBS4	358 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ZNF391	Q9UJN7	358 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PKDREJ	Q9NTG1	2253 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	IGSF23	A1L1A6	192 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	AP4M1	O00189	453 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	CDIPT	O14735	213 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	TAAR5	O14804	337 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	IGLV2-14	P01704	120 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	GRP	P07492	148 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	EPHA1	P21709	976 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	APLNR	P35414	380 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RPS10	P46783	165 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	LINC00205	P59089	165 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	HERV-K104	P61576	105 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ARL6IP1	Q15041	203 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RNPS1	Q15287	305 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	NRN1L	Q496H8	165 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ALKBH2	Q6NS38	261 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ZNF343	Q6P1L6	599 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369		Q6P435	159 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	SELENOH	Q8IZQ5	122 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RPRML	Q8N4K4	120 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	CNEP1R1	Q8N9A8	125 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	C9orf106	Q8NAJ2	232 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	SCCPDH	Q8NBX0	429 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	SLC25A40	Q8TBP6	338 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	GTF3A	Q92664	365 aa	Known RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	PFDN5	Q99471	154 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ASCL3	Q9NQ33	180 aa		4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.89	□□□□□ -1.63
LRRC49-223	ENST00000560369	ASH1L	Q9NR48	2969 aa	Known RBP	4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	CDRT15L2	A8MXV6	281 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369		K7EM74	188 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	ADAM20	O43506	726 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	SMPD2	O60906	423 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	JTB	O76095	146 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	IFNA21	P01568	189 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	FBP1	P09467	338 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	PAX6	P26367	422 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	ARR3	P36575	388 aa		4.88	□□□□□ -1.63
LRRC49-223	ENST00000560369	NDUFA6	P56556	154 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms