RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 NAA60Q9H7X0 242 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 RAB18Q9NP72 206 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 RAB9BQ9NP90 201 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 SLC2A9Q9NRM0 540 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 DCAF16Q9NXF7 216 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 KCNIP3Q9Y2W7 256 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 DYSFO75923 2080 aa12.06□□□□□ -0.48
ZEB1-218ENST00000560196 CACNA1BQ00975 2339 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 IGKV1D-13A0A0B4J2D9 117 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 IGHV1-69-2A0A0G2JMI3 117 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
ZEB1-218ENST00000560196 C15orf65H3BRN8 121 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 HBZP02008 142 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 WNT2P09544 360 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 IGKV1-13P0DP09 117 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 RBMXP38159 391 aaKnown RBP12.05□□□□□ -0.48
ZEB1-218ENST00000560196 NKX2-5P52952 324 aaPredicted RBP12.05□□□□□ -0.48
ZEB1-218ENST00000560196 HTD2P86397 168 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 MSMO1Q15800 293 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 ZNF843Q8N446 348 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 ZNRF1Q8ND25 227 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 OR13A1Q8NGR1 328 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 OR2T35Q8NGX2 323 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 OR1L1Q8NH94 360 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
ZEB1-218ENST00000560196 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 OR1A1Q9P1Q5 309 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
ZEB1-218ENST00000560196 ICE1Q9Y2F5 2266 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 G3V3Q6 166 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 SPINT2O43291 252 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 NDUFA2O43678 99 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 SNAPC5O75971 98 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 SIX6O95475 246 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CD8AP01732 235 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 GYPAP02724 150 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 DANCRP0C864 163 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CGB3P0DN86 165 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CGB7P0DN87 165 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 DNASE1P24855 282 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 IL2RGP31785 369 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
ZEB1-218ENST00000560196 MRPS11P82912 194 aaKnown RBP12.04□□□□□ -0.48
ZEB1-218ENST00000560196 DCAF12L2Q5VW00 463 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 LRTM2Q8N967 370 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 DEFB108BQ8NET1 73 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 SECTM1Q8WVN6 248 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 IL1F10Q8WWZ1 152 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CCL17Q92583 94 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 AKR1E2Q96JD6 320 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CCL13Q99616 98 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 VRK1Q99986 396 aaPredicted RBP12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CHIAQ9BZP6 476 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 RDH8Q9NYR8 311 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 KAAG1Q9UBP8 84 aa12.04□□□□□ -0.48
ZEB1-218ENST00000560196 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 SMLR1H3BR10 107 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 F2RL2O00254 374 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 MPPED1O15442 326 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 HSPA12AO43301 675 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 S100GP29377 79 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 EDDM3AQ14507 147 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 TMEM187Q14656 261 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 HFEQ30201 348 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 TMEM30BQ3MIR4 351 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 PHLDA2Q53GA4 152 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 BVESQ8NE79 360 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 NEU4Q8WWR8 484 aaPredicted RBP12.03□□□□□ -0.48
ZEB1-218ENST00000560196 CORO2AQ92828 525 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 ARL11Q969Q4 196 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 LINC00574Q9H8X3 128 aa12.03□□□□□ -0.48
ZEB1-218ENST00000560196 KLF2Q9Y5W3 355 aaPredicted RBP12.03□□□□□ -0.48
ZEB1-218ENST00000560196 C1QL1O75973 258 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 SELLP14151 372 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 CEACAM6P40199 344 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 SRPXP78539 464 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
ZEB1-218ENST00000560196 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.49
ZEB1-218ENST00000560196 GSG1LQ6UXU4 331 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 ZNF818PQ6ZRF7 136 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 PRR18Q8N4B5 295 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 TPRX1Q8N7U7 411 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 ZBTB34Q8NCN2 500 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
ZEB1-218ENST00000560196 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
ZEB1-218ENST00000560196 A6NNC1 897 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms