RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-213ENST00000560175 TRAV1-2A0A0B4J238 106 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 TRDV1A0A1B0GX56 115 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 FOXI3A8MTJ6 420 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-213ENST00000560175 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 AIPO00170 330 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 TIMM23O14925 209 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 LDLRAD4O15165 306 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 MPIG6BO95866 241 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 AMY1AP04745 511 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 AMY2AP04746 511 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 RCC1P18754 421 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-213ENST00000560175 PSMD7P51665 324 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 ZNF137PP52743 207 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 BLCAPP62952 87 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 TRAT1Q6PIZ9 186 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 Q6ZS46 218 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 OR2W3Q7Z3T1 314 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 SPARTQ8N0X7 666 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 ZNF439Q8NDP4 499 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 CCDC107Q8WV48 283 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 LEAP2Q969E1 77 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 FAM46BQ96A09 425 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 RBM14Q96PK6 669 aaKnown RBP10.57□□□□□ -0.72
SMAD3-213ENST00000560175 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 TMEM59Q9BXS4 323 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 PRSS22Q9GZN4 317 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 LPAR5Q9H1C0 372 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 Q9H521 79 aa10.57□□□□□ -0.72
SMAD3-213ENST00000560175 AK6Q9Y3D8 172 aaKnown RBP10.57□□□□□ -0.72
SMAD3-213ENST00000560175 A0A0A6YYD4 124 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 A0A1W2PPI3 338 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 OR2F2O95006 317 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 MNDAP41218 407 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 RAB7AP51149 207 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 ARHGDIBP52566 201 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-213ENST00000560175 EBI3Q14213 229 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 DIAPH2-AS1Q14236 149 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 LY6G6FQ5SQ64 297 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 C6orf183Q5T699 404 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 ZNF880Q6PDB4 577 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
SMAD3-213ENST00000560175 OR8H3Q8N146 312 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 OR4K15Q8NH41 348 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 MRPL30Q8TCC3 161 aaKnown RBP10.56□□□□□ -0.72
SMAD3-213ENST00000560175 SULT4A1Q9BR01 284 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 RAB9BQ9NP90 201 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 TRAPPC2LQ9UL33 140 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 V9GY05 133 aa10.56□□□□□ -0.72
SMAD3-213ENST00000560175 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-213ENST00000560175 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 SDCBPO00560 298 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-213ENST00000560175 SPINT2O43291 252 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 NAPSAO96009 420 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 IGHV3-7P01780 117 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 HBZP02008 142 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 ARSBP15848 533 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 CD24P25063 80 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
SMAD3-213ENST00000560175 RANBP1P43487 201 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 ZNF134P52741 427 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 TMEM50BP56557 158 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 HTD2P86397 168 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 RPEQ96AT9 228 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 NICN1Q9BSH3 213 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 FAAP24Q9BTP7 215 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 TAF9BQ9HBM6 251 aa10.55□□□□□ -0.72
SMAD3-213ENST00000560175 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
SMAD3-213ENST00000560175 M0QZ24 198 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 CCRL2O00421 344 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 FAM106CPP0CH98 169 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 FGF9P31371 208 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-213ENST00000560175 LTC4SQ16873 150 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 MORN2Q502X0 79 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 CT45A1Q5HYN5 189 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-213ENST00000560175 Q6ZPA2 131 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 C6orf201Q7Z4U5 140 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 CT45A3Q8NHU0 189 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 TOMM40LQ969M1 308 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 AKR1E2Q96JD6 320 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 SLC25A33Q9BSK2 321 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 KCNK15Q9H427 330 aa10.54□□□□□ -0.72
SMAD3-213ENST00000560175 A0A1W2PPE3 182 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms