RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 NFYBP25208 207 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
RPL28-209ENST00000560055 AANATQ16613 207 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 CTF1Q16619 201 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 TRAT1Q6PIZ9 186 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 DYNAPQ8N1N2 210 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 MALSU1Q96EH3 234 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 NAA50Q9GZZ1 169 aaKnown RBP13.63□□□□□ -0.23
RPL28-209ENST00000560055 AK3Q9UIJ7 227 aa13.63□□□□□ -0.23
RPL28-209ENST00000560055 METTL21EPA6NDL7 271 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 HBZP02008 142 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 PAX6P26367 422 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 VBP1P61758 197 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 TMEM30BQ3MIR4 351 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 OLFML2AQ68BL7 652 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 CROCCP3Q8IVE0 287 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.62□□□□□ -0.23
RPL28-209ENST00000560055 OR9G1Q8NH87 305 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 HDHD3Q9BSH5 251 aaPredicted RBP13.62□□□□□ -0.23
RPL28-209ENST00000560055 C19orf24Q9BVV8 132 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 CHIAQ9BZP6 476 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 RIMS4Q9H426 269 aaPredicted RBP13.62□□□□□ -0.23
RPL28-209ENST00000560055 TAF9BQ9HBM6 251 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 GFOD1Q9NXC2 390 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 PSG11Q9UQ72 335 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 ETV7Q9Y603 341 aa13.62□□□□□ -0.23
RPL28-209ENST00000560055 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 MFNGO00587 321 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 SPINT2O43291 252 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 HIST1H1DP16402 221 aaKnown RBP13.61□□□□□ -0.23
RPL28-209ENST00000560055 HTR1DP28221 377 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 HMGN3Q15651 99 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 LTC4SQ16873 150 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 GPR141Q7Z602 305 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 OR5H6Q8NGV6 325 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 LEAP2Q969E1 77 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 SLC25A46Q96AG3 418 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 SLC25A38Q96DW6 304 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 MMP28Q9H239 520 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 DPAGT1Q9H3H5 408 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 RAB9BQ9NP90 201 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 C12orf4Q9NQ89 552 aa13.61□□□□□ -0.23
RPL28-209ENST00000560055 LY6LH3BQJ8 138 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 BUB1B-PAK6H3BSN5 160 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 J3QR06 171 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 SDCBPO00560 298 aaPredicted RBP13.6□□□□□ -0.23
RPL28-209ENST00000560055 SERPINB10P48595 397 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 SSX2Q16385 188 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 LRRC75BQ2VPJ9 315 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 Q3ZCU0 254 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 GPR107Q5VW38 600 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 MOB1BQ7L9L4 216 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 C5orf24Q7Z6I8 188 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 OR5R1Q8NH85 324 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 SSX3Q99909 188 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 ATG5Q9H1Y0 275 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPL28-209ENST00000560055 RHBDL2Q9NX52 303 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 KCNIP1Q9NZI2 227 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 ABRACLQ9P1F3 81 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 DPM3Q9P2X0 92 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 SPATA2Q9UM82 520 aa13.6□□□□□ -0.23
RPL28-209ENST00000560055 SERPINE3A8MV23 424 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 TOR1AO14656 332 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 GNB3P16520 340 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 PRRX1P54821 245 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 FAM53AQ6NSI3 398 aaPredicted RBP13.59□□□□□ -0.23
RPL28-209ENST00000560055 LINC00311Q8N616 119 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 NDNFQ8TB73 568 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 PIFOQ8TCI5 191 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 CMSS1Q9BQ75 279 aaKnown RBP13.59□□□□□ -0.23
RPL28-209ENST00000560055 CHMP1AQ9HD42 196 aaPredicted RBP13.59□□□□□ -0.23
RPL28-209ENST00000560055 Q9N2K0 584 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 VPREB3Q9UKI3 123 aa13.59□□□□□ -0.23
RPL28-209ENST00000560055 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 LEUTXA8MZ59 168 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 H3BUX3 64 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 SCGNO76038 276 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 RPL5P46777 297 aaKnown RBP13.58□□□□□ -0.24
RPL28-209ENST00000560055 DYNLT3P51808 116 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 HTD2P86397 168 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 PRR18Q8N4B5 295 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 TNFRSF19Q9NS68 423 aa13.58□□□□□ -0.24
RPL28-209ENST00000560055 HILPDAQ9Y5L2 63 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms