RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 E7EWF7 191 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 F8VP50 259 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 RNASEK-C17orf49H0YIS7 233 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 ZMPSTE24O75844 475 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 PTNP21246 168 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 RWDD2BP57060 319 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 TRIP13Q15645 432 aaPredicted RBP0.82□□□□□ -2.28
CASC4-210ENST00000559550 FAM162BQ5T6X4 162 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 EBLN2Q6P2I7 272 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 Q6ZRN7 208 aaPredicted RBP0.82□□□□□ -2.28
CASC4-210ENST00000559550 OR9I1Q8NGQ6 314 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 TAPBPLQ9BX59 468 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 TMBIM4Q9HC24 238 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 TAS2R13Q9NYV9 303 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 CLEC2DQ9UHP7 191 aa0.82□□□□□ -2.28
CASC4-210ENST00000559550 IGKV2-29A2NJV5 120 aaPredicted RBP0.81□□□□□ -2.28
CASC4-210ENST00000559550 K7EQS6 105 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 DENRO43583 198 aaKnown RBP0.81□□□□□ -2.28
CASC4-210ENST00000559550 OTCP00480 354 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 OR4A8P0C604 315 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 NQO1P15559 274 aaKnown RBP0.81□□□□□ -2.28
CASC4-210ENST00000559550 HSPA13P48723 471 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 AQP5P55064 265 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 PDGFRLQ15198 375 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 CAVIN4Q5BKX8 364 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 LGALS9CQ6DKI2 356 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 ZNF563Q8TA94 476 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 MITD1Q8WV92 249 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 PGLYRP3Q96LB9 341 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 SMDT1Q9H4I9 107 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 BZW2Q9Y6E2 419 aaKnown RBP0.81□□□□□ -2.28
CASC4-210ENST00000559550 COL6A6A6NMZ7 2263 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 PLCH2O75038 1416 aa0.81□□□□□ -2.28
CASC4-210ENST00000559550 MYO15BQ96JP2 1530 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 SIGLEC16A6NMB1 481 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 UBDO15205 165 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 POLR3GO15318 223 aaPredicted RBP0.8□□□□□ -2.28
CASC4-210ENST00000559550 CSTAP01040 98 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 LPAR6P43657 344 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 XIAPP98170 497 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 DEFB119Q8N690 84 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 TRIML2Q8N7C3 387 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 OR11L1Q8NGX0 322 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 GTF2H4Q92759 462 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 TMBIM1Q969X1 311 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 GPR22Q99680 433 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 UPK3BQ9BT76 320 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 FAAP24Q9BTP7 215 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 HINT2Q9BX68 163 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 IFT46Q9NQC8 304 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 RBMX2Q9Y388 322 aaKnown RBP0.8□□□□□ -2.28
CASC4-210ENST00000559550 USH1CQ9Y6N9 552 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 PTPRJQ12913 1337 aa0.8□□□□□ -2.28
CASC4-210ENST00000559550 USP42Q9H9J4 1324 aaKnown RBP0.8□□□□□ -2.28
CASC4-210ENST00000559550 NCKAP5O14513 1909 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 ARHGAP32A7KAX9 2087 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 ADAMTSL1Q8N6G6 1762 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 PSMD11O00231 422 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 IGHV3-30-3P0DP02 117 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 CD36P16671 472 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 ALOX5APP20292 161 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 RPA3P35244 121 aaPredicted RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 C1QTNF8P60827 252 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 DYNLL1P63167 89 aaKnown RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 CD164Q04900 197 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 VN1R4Q7Z5H5 301 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 YIPF7Q8N8F6 280 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 OR4X1Q8NH49 305 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 ZNRF2Q8NHG8 242 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 C16orf78Q8WTQ4 265 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 NAP1L5Q96NT1 182 aaPredicted RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 Q9BRP9 147 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 C1QTNF6Q9BXI9 259 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 HAUS4Q9H6D7 363 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 C11orf49Q9H6J7 331 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 TXNL4BQ9NX01 149 aaKnown RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 NXT1Q9UKK6 140 aaKnown RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 FBXL3Q9UKT7 428 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 FN1P02751 2386 aaKnown RBP0.79□□□□□ -2.28
CASC4-210ENST00000559550 RTEL1-TNFRSF6BF6WH68 1400 aa0.79□□□□□ -2.28
CASC4-210ENST00000559550 ZNF638Q14966 1978 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 IGLV3-9A0A075B6K5 115 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 B4DEV8 164 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 LY6HO94772 140 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 ANGP03950 147 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 LYNX1P0DP58 116 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 PSMA1P25786 263 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 PEBP1P30086 187 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 GABARAPL2P60520 117 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 UBE2KP61086 200 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 SKP2Q13309 424 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 VAMP3Q15836 100 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 MRPL51Q4U2R6 128 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 SELENOHQ8IZQ5 122 aaKnown RBP0.78□□□□□ -2.28
CASC4-210ENST00000559550 CDRT4Q8N9R6 151 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 OR5D18Q8NGL1 313 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 OR2Y1Q8NGV0 311 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 TMIGD2Q96BF3 282 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 GALMQ96C23 342 aa0.78□□□□□ -2.28
CASC4-210ENST00000559550 LRRC39Q96DD0 335 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms